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PLM3-1_170_b2_sep16_scaffold_1121

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1121_1
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

Not on your lists

comp(1..363)
DNA (363bp) protein (121aa)
serine/threonine protein kinase bin=RBG_16_Aminicenantes_63_14 tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
serine/threonine protein kinase with PASTA sensor(s)
Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
PLM3-1_170_b2_sep16_scaffold_1121_2
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

977..2449
DNA (1473bp) protein (491aa)
Metallophosphoesterase/PKD domain protein Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D975_MYXXD
Uncharacterized protein {ECO:0000313|EMBL:KFE63742.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
metallophosphoesterase
PLM3-1_170_b2_sep16_scaffold_1121_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

2446..3810
DNA (1365bp) protein (455aa)
steT; amino acid permease; K03294 basic amino acid/polyamine antiporter, APA family bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
putative permease
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_1121_4
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3862..5604
DNA (1743bp) protein (581aa)
protein kinase/LuxR family transcriptional regulator (EC:2.7.11.1)
Protein kinase/ LuxR family transcriptional regulator Tax=Rhodococcus opacus M213 RepID=K8XC30_RHOOP
Protein kinase/ LuxR family transcriptional regulator {ECO:0000313|EMBL:EKT79083.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
PLM3-1_170_b2_sep16_scaffold_1121_5
RLO_PLX_64_10, Bacteria

Not on your lists

5547..7016
DNA (1470bp) protein (490aa)
Adenylate/guanylate cyclase Tax=uncultured candidate division OP1 bacterium RepID=H5SSM8_9BACT
transcriptional activator
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_170_b2_sep16_scaffold_1121_6
RLO_PLX_64_10, Bacteria

Not on your lists

7171..10851
DNA (3681bp) protein (1227aa)
Putative uncharacterized protein Tax=Caldithrix abyssi DSM 13497 RepID=H1XSR4_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_170_b2_sep16_scaffold_1121_7
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

comp(10767..12638)
DNA (1872bp) protein (624aa)
hypothetical protein Tax=Longispora albida RepID=UPI000362162C
serine/threonine protein kinase
Tax=RBG_16_Caldithrix_48_16_curated
PLM3-1_170_b2_sep16_scaffold_1121_8
RLO_PLX_64_10, Bacteria

Not on your lists

12686..16621
DNA (3936bp) protein (1312aa)
serine/threonine protein kinase bin=bin9_gal15 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
protein kinase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_170_b2_sep16_scaffold_1121_9
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16621..17676
DNA (1056bp) protein (352aa)
DNA-directed RNA polymerase subunit beta Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0STR0_XANCT
Hemolysin D {ECO:0000313|EMBL:KGM57667.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
RND family efflux transporter MFP subunit
PLM3-1_170_b2_sep16_scaffold_1121_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

17673..19718
DNA (2046bp) protein (682aa)
Peptidase M50 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZQ4_OPITP
peptidase M50
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b2_sep16_scaffold_1121_11
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

19801..21633
DNA (1833bp) protein (611aa)
HlyD family secretion protein Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IEX0_PHYMF
HlyD family secretion protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b2_sep16_scaffold_1121_12
unknown

Not on your lists

21829..21960
DNA (132bp) protein (44aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1121_13
unknown

Not on your lists

22180..22317
DNA (138bp) protein (46aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1121_14
unknown

Not on your lists

22614..22745
DNA (132bp) protein (44aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1121_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(22916..24832)
DNA (1917bp) protein (639aa)
Helix-turn-helix, Fis-type Tax=Nitrococcus mobilis Nb-231 RepID=A4BNL3_9GAMM
two component sigma54 specific Fis family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3-1_170_b2_sep16_scaffold_1121_16
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(25031..25546)
DNA (516bp) protein (172aa)
DinB family protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
DinB family protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_1121_17
RLO_PLX_64_10, Bacteria

Not on your lists

comp(25574..26227)
DNA (654bp) protein (218aa)
alias=16ft_combo_ws3_scaffold_11273_17 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_170_b2_sep16_scaffold_1121_18
unknown

Not on your lists

comp(26224..27129)
DNA (906bp) protein (302aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1121_19
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(27129..28247)
DNA (1119bp) protein (373aa)
aminotransferase (EC:2.6.1.-)
Aminotransferase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VT2_SOLUE
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b2_sep16_scaffold_1121_20
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28275..28640)
DNA (366bp) protein (122aa)
hypothetical protein Tax=Methylosarcina fibrata RepID=UPI00037FC521
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1121_21
unknown

Not on your lists

28867..29118
DNA (252bp) protein (84aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1121_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

29243..29929
DNA (687bp) protein (229aa)
Hypothetical conserved protein Tax=uncultured prokaryote RepID=H5SKM0_9ZZZZ
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3-1_170_b2_sep16_scaffold_1121_23
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

29929..30228
DNA (300bp) protein (100aa)
UPF0235 protein Bresu_0148 bin=GWC2_Methylomirabilis_70_24 species=Brevundimonas subvibrioides genus=Brevundimonas taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=BJP_IG2069_Chloroflexi_70_12
PLM3-1_170_b2_sep16_scaffold_1121_24
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

30225..31088
DNA (864bp) protein (288aa)
purine nucleoside phosphorylase I (EC:2.4.2.1)
Purine nucleoside phosphorylase Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QX39_ISOPI bin=16ft_combo_ws3_JS1 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_1121_25
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

Not on your lists

31085..34258
DNA (3174bp) protein (1058aa)
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase bin=GWA2_Ignavibacteria_55_11 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Tax=RBG_16_Zixibacteria_50_21_curated
PLM3-1_170_b2_sep16_scaffold_1121_26
RBG_16_RIF05_58_8_curated, RIF5, Bacteria

Not on your lists

34261..34650
DNA (390bp) protein (130aa)
DNA-binding protein Tax=Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602) RepID=E2PZQ4_STRC2 bin=16ft_combo_ws3_JS1 species=Streptomyces clavuligerus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF05_58_8_curated
PLM3-1_170_b2_sep16_scaffold_1121_27
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

34647..35153
DNA (507bp) protein (169aa)
signal peptidase II (EC:3.4.23.36)
Lipoprotein signal peptidase Tax=Syntrophus aciditrophicus (strain SB) RepID=LSPA_SYNAS bin=16ft_combo_ws3_JS1 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_1121_28
RLO_PLX_64_10, Bacteria

Not on your lists

35113..36075
DNA (963bp) protein (321aa)
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-)
Pseudouridine synthase Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJ12_THEM7
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_170_b2_sep16_scaffold_1121_29
RLO_PLX_64_10, Bacteria

Not on your lists

36557..37603
DNA (1047bp) protein (349aa)
aminodeoxychorismate lyase; K07082 UPF0755 protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_170_b2_sep16_scaffold_1121_30
R_NC10_66_22, NC10, Bacteria

Not on your lists

37600..38487
DNA (888bp) protein (296aa)
exoenzyme S synthesis protein B Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B5C9F5
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying items 1-30 of 37 in total

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