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PLM3-1_170_b2_sep16_scaffold_1730

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1730_1
unknown

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comp(34..216)
DNA (183bp) protein (61aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1730_2
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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597..1991
DNA (1395bp) protein (465aa)
beta-Ala-His dipeptidase (EC:3.4.13.20)
Beta-Ala-His dipeptidase {ECO:0000313|EMBL:AEB11996.1}; EC=3.4.13.20 {ECO:0000313|EMBL:AEB11996.1};; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1).;"
Beta-Ala-His dipeptidase Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NK25_MARHT
PLM3-1_170_b2_sep16_scaffold_1730_3
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2290..3153)
DNA (864bp) protein (288aa)
Putative dihydrolipoyllysine-residue succinyltransferase Tax=Streptomyces scabies (strain 87.22) RepID=C9YTR6_STRSW
dihydrolipoyllysine-residue succinyltransferase
Putative dihydrolipoyllysine-residue succinyltransferase {ECO:0000313|EMBL:CBG73704.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabies (strain 87.22) (Streptomyces scabiei).;"
PLM3-1_170_b2_sep16_scaffold_1730_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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comp(3150..4670)
DNA (1521bp) protein (507aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003604604
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3-1_170_b2_sep16_scaffold_1730_5
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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4767..5378
DNA (612bp) protein (204aa)
pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000255|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000255|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000255|HAMAP-Rule:MF_01629}; Short=PNPOx {ECO:0000255|HAMAP-Rule:MF_01629};; Pyridoxal 5'-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_01629}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
pyridoxamine 5''''-phosphate oxidase Tax=Rubrobacter xylanophilus RepID=UPI0000D85D4F
PLM3-1_170_b2_sep16_scaffold_1730_6
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

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5399..6208
DNA (810bp) protein (270aa)
Tax=RBG_13_Chloroflexi_68_17_curated
PLM3-1_170_b2_sep16_scaffold_1730_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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6296..7765
DNA (1470bp) protein (490aa)
Hypothetical membrane protein bin=GWC2_Methylomirabilis_70_16 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3-1_170_b2_sep16_scaffold_1730_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(7878..8459)
DNA (582bp) protein (194aa)
alias=16ft_combo_ws3_scaffold_11554_7 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_1730_9
unknown

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8742..9542
DNA (801bp) protein (267aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1730_10
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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9873..10622
DNA (750bp) protein (250aa)
succinate dehydrogenase membrane anchor subunit (sdhD) (EC:1.3.5.1)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000364220E
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM3-1_170_b2_sep16_scaffold_1730_11
RLO_RIF02_62_27, RIF2, Bacteria

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10619..11434
DNA (816bp) protein (272aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000363DC19
fumarate reductase/succinate dehydrogenase flavoprotein domain protein
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
Displaying 11 items

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