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PLM3-1_170_b2_sep16_scaffold_1774

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1774_1
unknown

Not on your lists

comp(3..191)
DNA (189bp) protein (63aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1774_2
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(430..1653)
DNA (1224bp) protein (408aa)
2-hydroxyglutarate dehydrogenase (EC:1.1.99.2)
FAD dependent oxidoreductase bin=GWC2_Chloroflexi_73_18 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3-1_170_b2_sep16_scaffold_1774_3
Desulfurivibrio alkaliphilus, Desulfurivibrio, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1724..2752)
DNA (1029bp) protein (343aa)
Glycosyl transferase family 2 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6YZT3_DESAT
glycosyl transferase family 2
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADH85090.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfurivibrio.;" source="Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2).;"
PLM3-1_170_b2_sep16_scaffold_1774_4
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2749..3129)
DNA (381bp) protein (127aa)
GtrA family protein Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DLM2_9GAMM
polysaccharide synthesis protein GtrA
Tax=BJP_IG2103_Rhodocyclales_63_50
PLM3-1_170_b2_sep16_scaffold_1774_5
unknown

Not on your lists

comp(3126..3311)
DNA (186bp) protein (62aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1774_6
unknown

Not on your lists

comp(3308..3496)
DNA (189bp) protein (63aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1774_7
R_RIF_OD1_09_47_33b, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

4161..5312
DNA (1152bp) protein (384aa)
Kelch repeat protein Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MNC9_CORCM
kelch repeat protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_09_47_33b_curated
PLM3-1_170_b2_sep16_scaffold_1774_8
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

5507..6409
DNA (903bp) protein (301aa)
Putative uncharacterized protein Tax=Caldithrix abyssi DSM 13497 RepID=H1XXC7_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:EHO41912.1}; species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1774_9
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6563..7723)
DNA (1161bp) protein (387aa)
Putative glycosyltransferase EpsF {ECO:0000313|EMBL:KFB66899.1}; EC=2.4.-.- {ECO:0000313|EMBL:KFB66899.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
Sugar transferase, PEP-CTERM/EpsH1 system associated Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RT02_ACCPU
sugar transferase
PLM3-1_170_b2_sep16_scaffold_1774_10
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7720..9315)
DNA (1596bp) protein (532aa)
Polysaccharide deacetylase Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RT01_ACCPU
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ACV34744.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
PLM3-1_170_b2_sep16_scaffold_1774_11
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9312..10673)
DNA (1362bp) protein (454aa)
Wzy family polymerase, exosortase system type 1 associated Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C542_NITHN
wzy family polymerase, exosortase system type 1 associated
Wzy family polymerase, exosortase system type 1 associated {ECO:0000313|EMBL:ADE15265.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
PLM3-1_170_b2_sep16_scaffold_1774_12
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(10743..11540)
DNA (798bp) protein (266aa)
Uncharacterized protein Tax=Marinobacter sp. BSs20148 RepID=M1F8C6_9ALTE
hypothetical protein
Tax=RBG_13_Planctomycetes_63_9_curated
PLM3-1_170_b2_sep16_scaffold_1774_13
unknown

Not on your lists

comp(11489..11803)
DNA (315bp) protein (105aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1774_14
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

12196..12936
DNA (741bp) protein (247aa)
Transposase Tax=uncultured prokaryote RepID=H5SLU0_9ZZZZ
transposase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3-1_170_b2_sep16_scaffold_1774_15
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

12936..13193
DNA (258bp) protein (86aa)
hypothetical protein Tax=Geopsychrobacter electrodiphilus RepID=UPI00037F3ABE
transposase, IS4
Transposase, IS4 {ECO:0000313|EMBL:CBK42538.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3-1_170_b2_sep16_scaffold_1774_16
unknown

Not on your lists

13358..14134
DNA (777bp) protein (259aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1774_17
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14179..15618)
DNA (1440bp) protein (480aa)
hypothetical protein Tax=Janthinobacterium sp. CG3 RepID=UPI00036A812A
Glycosyl transferase family protein {ECO:0000313|EMBL:ENO78169.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1774_18
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

comp(15687..18938)
DNA (3252bp) protein (1084aa)
Subtilisin-like serine protease bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
subtilisin-like serine protease
Tax=BJP_IG2158_Zixibacteria_48_33
PLM3-1_170_b2_sep16_scaffold_1774_19
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19149..20279)
DNA (1131bp) protein (377aa)
Group 1 glycosyl transferase Tax=Sulfuricella denitrificans skB26 RepID=S6AK71_9PROT
Glycosyl transferase family 1 {ECO:0000313|EMBL:KIO49423.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
group 1 glycosyl transferase
PLM3-1_170_b2_sep16_scaffold_1774_20
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20276..21487)
DNA (1212bp) protein (404aa)
glycosyl transferase family 1 Tax=Thioalkalivibrio RepID=UPI000373A0F4
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ADC73007.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sp. (strain K90mix).;"
PLM3-1_170_b2_sep16_scaffold_1774_21
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21490..23490)
DNA (2001bp) protein (667aa)
Asparagine synthetase Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y613_NITMU
asparagine synthase
Tax=RBG_16_Betaproteobacteria_58_11_curated
PLM3-1_170_b2_sep16_scaffold_1774_22
unknown

Not on your lists

comp(23615..23905)
DNA (291bp) protein (97aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1774_23
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24188..25144
DNA (957bp) protein (319aa)
Coenzyme F390 synthetase Tax=Nitrosospira sp. APG3 RepID=M5DLK7_9PROT
Capsule biosynthesis protein CapK {ECO:0000313|EMBL:KIO49422.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
capsular polysaccharide biosynthesis protein CapK
PLM3-1_170_b2_sep16_scaffold_1774_24
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

25229..27124
DNA (1896bp) protein (632aa)
asparagine synthase (EC:6.3.5.4)
hypothetical protein Tax=Thioalkalivibrio sp. ALJ24 RepID=UPI00035D34E1
Tax=RBG_16_Nitrospirae_64_22_curated
PLM3-1_170_b2_sep16_scaffold_1774_25
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27128..28201
DNA (1074bp) protein (358aa)
Polysaccharide deacetylase Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RT18_ACCPU
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ACV34761.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
PLM3-1_170_b2_sep16_scaffold_1774_26
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

28365..28640
DNA (276bp) protein (92aa)
Uncharacterized protein Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TYG8_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY87862.1}; species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
PLM3-1_170_b2_sep16_scaffold_1774_27
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28642..30213
DNA (1572bp) protein (524aa)
Long-chain-fatty-acid--CoA ligase LcfB Tax=Shinella zoogloeoides DD12 RepID=V5D406_9RHIZ
fadD; long-chain fatty acid-CoA ligase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1774_28
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30216..31520
DNA (1305bp) protein (435aa)
Orn/DAP/Arg decarboxylase 2 Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7KX28_METC4
Orn/DAP/Arg decarboxylase 2
Orn/DAP/Arg decarboxylase 2 {ECO:0000313|EMBL:ACK84553.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain CM4 / NCIMB 13688); (Methylobacterium chloromethanicum).;"
PLM3-1_170_b2_sep16_scaffold_1774_29
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31549..32793
DNA (1245bp) protein (415aa)
Putative uncharacterized protein Tax=Nitrosococcus oceani RepID=Q3J9S6_NITOC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA58420.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848).;"
PLM3-1_170_b2_sep16_scaffold_1774_30
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32869..34113)
DNA (1245bp) protein (415aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6APE8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EYF07830.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
Displaying 30 items

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