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PLM3-1_170_b2_sep16_scaffold_1941

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1941_1
RLO_Omnitrophica_50_11, Omnitrophica, Bacteria

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251..1435
DNA (1185bp) protein (395aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
filamentation induced by cAMP protein fic
Tax=RIFCSPLOWO2_12_FULL_Omnitrophica_50_11_curated
PLM3-1_170_b2_sep16_scaffold_1941_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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1515..2576
DNA (1062bp) protein (354aa)
Proline-specific peptidase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CIH9_THET1
proline-specific peptidase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b2_sep16_scaffold_1941_3
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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2721..2963
DNA (243bp) protein (81aa)
hypothetical protein Tax=Methylosarcina fibrata RepID=UPI0003617E22
Antitoxin MazE6 {ECO:0000313|EMBL:KFB78538.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1941_4
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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2963..3301
DNA (339bp) protein (113aa)
mRNA interferase Tax=gamma proteobacterium HdN1 RepID=E1VLV8_9GAMM
PemK-like protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b2_sep16_scaffold_1941_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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3502..4374
DNA (873bp) protein (291aa)
Uncharacterized protein Tax=Bordetella bronchiseptica RepID=K0MQX1_BORBM bin=16ft_combo_ws3_JS1 species=Bordetella bronchiseptica genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_1941_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(4381..5250)
DNA (870bp) protein (290aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Bordetella bronchiseptica genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_1941_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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5533..5937
DNA (405bp) protein (135aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1YEN9_9DELT
plasmid pRiA4b ORF-3 family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3-1_170_b2_sep16_scaffold_1941_8
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

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6160..6534
DNA (375bp) protein (125aa)
ArsR family transcriptional regulator Tax=Burkholderia kururiensis RepID=UPI00034A6D20
ArsR family transcriptional regulator {ECO:0000313|EMBL:KIF29522.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
Putative transcriptional regulator, ArsR family
PLM3-1_170_b2_sep16_scaffold_1941_9
unknown

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6761..7180
DNA (420bp) protein (140aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1941_10
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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7603..8076
DNA (474bp) protein (158aa)
hypothetical protein bin=BACIGN_2 species=Flavobacterium sp. F52 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
protein of unknown function DUF1572
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b2_sep16_scaffold_1941_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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8073..8672
DNA (600bp) protein (200aa)
DNA-3-methyladenine glycosylase I
DNA-3-methyladenine glycosylase I bin=GWB2_Pelobacter_53_15 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3-1_170_b2_sep16_scaffold_1941_12
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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8677..9138
DNA (462bp) protein (154aa)
GCN5-related N-acetyltransferase Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PQH5_MEIRD
N-acetyltransferase GCN5
N-acetyltransferase GCN5 {ECO:0000313|EMBL:AGK04173.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21); (Thermus ruber).;"
PLM3-1_170_b2_sep16_scaffold_1941_13
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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9191..9463
DNA (273bp) protein (91aa)
Uncharacterized protein Tax=Desulfovibrio hydrothermalis AM13 = DSM 14728 RepID=L0RCI1_9DELT
hypothetical protein
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3-1_170_b2_sep16_scaffold_1941_14
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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9593..9874
DNA (282bp) protein (94aa)
prevent-host-death family protein bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
prevent-host-death family protein
Tax=CSP1_3_Armatimonadetes
PLM3-1_170_b2_sep16_scaffold_1941_15
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

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10182..10511
DNA (330bp) protein (110aa)
Uncharacterized protein bin=GWC2_Chloroflexi_49_37 species=Streptomyces davawensis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
hypothetical protein
Tax=GWC2_Chloroflexi_49_37_curated
PLM3-1_170_b2_sep16_scaffold_1941_16
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10617..10763
DNA (147bp) protein (49aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036DE5E3
Uncharacterized protein {ECO:0000313|EMBL:AKF10361.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
Displaying 16 items

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