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PLM3-1_170_b2_sep16_scaffold_7106

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_7106_1
GWC2_Elusimicrobia_64_44_curated, Elusimicrobia, Bacteria

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comp(2..112)
DNA (111bp) protein (37aa)
acetyl-CoA carboxylase, biotin carboxylase
Acetyl-CoA carboxylase, biotin carboxylase bin=GWC2_Elusimicrobia_64_44 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
Tax=GWC2_Elusimicrobia_64_44_curated
PLM3-1_170_b2_sep16_scaffold_7106_2
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(109..912)
DNA (804bp) protein (268aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:KFX26422.1}; EC=4.2.1.17 {ECO:0000313|EMBL:KFX26422.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (Pseudomonas solanacearum).;"
p-hydroxycinnamoyl CoA hydratase/lyase Tax=Ralstonia solanacearum (strain Po82) RepID=F6G4G7_RALS8
fca; p-hydroxycinnamoyl CoA hydratase/lyase
PLM3-1_170_b2_sep16_scaffold_7106_3
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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comp(959..2566)
DNA (1608bp) protein (536aa)
Acetyl-CoA carboxylase carboxyltransferase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I9C6_CALAS
accB; acetyl-CoA carboxylase carboxyltransferase
Acetyl-CoA carboxylase carboxyltransferase {ECO:0000313|EMBL:BAM01864.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM3-1_170_b2_sep16_scaffold_7106_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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2697..4487
DNA (1791bp) protein (597aa)
multi-sensor signal transduction histidine kinase (EC:2.7.13.3)
PAS/PAC Sensor Hybrid Histidine Kinase bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Robiginitalea biformata genus=Robiginitalea taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_7106_5
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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4533..4976
DNA (444bp) protein (148aa)
Uncharacterized protein Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I655_METCZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD00702.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 /; HZ254).;"
PLM3-1_170_b2_sep16_scaffold_7106_6
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5064..5579)
DNA (516bp) protein (172aa)
Uncharacterized protein Tax=Cystobacter fuscus DSM 2262 RepID=S9PK90_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX64645.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_7106_7
Spiribacter salinus, Spiribacter, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5524..5808)
DNA (285bp) protein (95aa)
dioxygenase Tax=Verrucomicrobium spinosum RepID=UPI000174684D
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AGM41039.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Spiribacter.;" source="Spiribacter salinus M19-40.;"
PLM3-1_170_b2_sep16_scaffold_7106_8
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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comp(5851..6972)
DNA (1122bp) protein (374aa)
Peptidase M50 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMS7_9BACT
peptidase M50
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b2_sep16_scaffold_7106_9
RLO_PLX_64_10, Bacteria

Not on your lists

comp(6995..7648)
DNA (654bp) protein (218aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037F2AEA
transporter
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_170_b2_sep16_scaffold_7106_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(7665..9716)
DNA (2052bp) protein (684aa)
prolyl oligopeptidase family protein (EC:3.4.-.-)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase Tax=Rheinheimera sp. A13L RepID=F7NZ42_9GAMM bin=16ft_combo_ws3_JS1 species=Rheinheimera sp. A13L genus=Rheinheimera taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 10 items

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