ggKbase home page

PLM3-1_170_b2_sep16_scaffold_5273

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_5273_1
RIFOXYD2_FULL_Planctomycetes_41_16_curated, Planctomycetes, Bacteria

Not on your lists

comp(3..404)
DNA (402bp) protein (134aa)
chlorophyll synthase (EC:2.5.1.62)
Chlorophyll synthase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEX6_CHLTF
Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated
PLM3-1_170_b2_sep16_scaffold_5273_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(401..2404)
DNA (2004bp) protein (668aa)
hypothetical protein Tax=unclassified Aminicenantes RepID=UPI00036BF5AA
type I phosphodiesterase/nucleotide pyrophosphatase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b2_sep16_scaffold_5273_3
unknown

Not on your lists

2441..4312
DNA (1872bp) protein (624aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_5273_4
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

4347..6659
DNA (2313bp) protein (771aa)
Putative uncharacterized protein Tax=Roseiflexus sp. (strain RS-1) RepID=A5USK9_ROSS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ89612.1}; Flags: Precursor;; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
PLM3-1_170_b2_sep16_scaffold_5273_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6656..7582
DNA (927bp) protein (309aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
N-acetylmuramic acid 6-phosphate etherase Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGR0_RHOM4
RpiR family transcriptional regulator
PLM3-1_170_b2_sep16_scaffold_5273_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

7555..8829
DNA (1275bp) protein (425aa)
ABC-type sugar transport system, periplasmic component Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J7U1_MARPK bin=16ft_combo_ws3_JS1 species=Marinitoga piezophila genus=Marinitoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
sugar ABC transporter substrate-binding protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_5273_7
BJP_IG2103_ACD39_50_23, ACD39, Bacteria

Not on your lists

8826..9698
DNA (873bp) protein (291aa)
permease component of ABC-type sugar transporter; K02025 multiple sugar transport system permease protein bin=BACIGN_2 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=BACIGN_2 organism_group=Unknown_CP
binding-protein-dependent transport systems inner membrane component
Tax=BJP_IG2103_ACD39_50_23
PLM3-1_170_b2_sep16_scaffold_5273_8
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

9695..10540
DNA (846bp) protein (282aa)
hypothetical protein Tax=Paenibacillus sanguinis RepID=UPI00037DED21
binding-protein-dependent transport systems inner membrane component
Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
PLM3-1_170_b2_sep16_scaffold_5273_9
unknown

Not on your lists

10537..10671
DNA (135bp) protein (45aa)

This feature has no annotations

Displaying 9 items

View Taxonomy