ggKbase home page

PLM3-1_170_b2_sep16_scaffold_5577

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_5577_1
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3..2744
DNA (2742bp) protein (914aa)
Uncharacterized protein Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W0Y5_UNCMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ37958.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50).;"
PLM3-1_170_b2_sep16_scaffold_5577_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

2863..3489
DNA (627bp) protein (209aa)
Undecaprenyl-phosphate galactose phosphotransferase Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HA73_ANADF bin=16ft_combo_ws3_JS1 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
undecaprenyl-phosphate galactose phosphotransferase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_5577_3
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3539..4540
DNA (1002bp) protein (334aa)
Mannose-1-phosphate guanylyltransferase Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MH63_CORCM
manAC; mannose-1-phosphate guanylyltransferase
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:AFE09317.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
PLM3-1_170_b2_sep16_scaffold_5577_4
Erwinia typographi, Erwinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4527..5054
DNA (528bp) protein (176aa)
Rare lipoprotein A Tax=Enterobacter sp. Ag1 RepID=J1GGE3_9ENTR
Rare lipoprotein A {ECO:0000313|EMBL:KGT90355.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Erwinia.;" source="Erwinia typographi.;"
lipoprotein
PLM3-1_170_b2_sep16_scaffold_5577_5
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

5086..6687
DNA (1602bp) protein (534aa)
glycogen/starch synthase (EC:2.4.1.21)
Glycogen synthase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJP6_9BACT bin=16ft_combo_ws3_JS1 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_Zixibacteria_43_9_curated
PLM3-1_170_b2_sep16_scaffold_5577_trna_1
unknown

Not on your lists

6723..6796
DNA (74bp)
transferRNA Gly
PLM3-1_170_b2_sep16_scaffold_5577_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6924..7232
DNA (309bp) protein (103aa)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI000307886C
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3-1_170_b2_sep16_scaffold_5577_7
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

7372..10428
DNA (3057bp) protein (1019aa)
serine/threonine protein kinase (EC:2.7.11.1)
hypothetical protein Tax=Mycobacterium sp. 141 RepID=UPI00037E441F
Adenylate/guanylate cyclase {ECO:0000313|EMBL:BAL59164.1}; species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
PLM3-1_170_b2_sep16_scaffold_5577_8
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10634..11263
DNA (630bp) protein (210aa)
probable RNA polymerase sigma factor cnrH Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C35E9 bin=ACD66 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=ACD66 organism_group=OD1 (Parcubacteria) organism_desc=OD1
ECF family RNA polymerase sigma factor
Tax=RBG_16_Gammaproteobacteria_66_13_curated
PLM3-1_170_b2_sep16_scaffold_5577_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

11260..12852
DNA (1593bp) protein (531aa)
Serine/threonine protein kinase Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WZ73_ACISM
serine/threonine protein kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b2_sep16_scaffold_5577_10
unknown

Not on your lists

13041..13565
DNA (525bp) protein (175aa)

This feature has no annotations

Displaying 11 items

View Taxonomy