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PLM3-1_170_b2_sep16_scaffold_5767

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_5767_1
unknown

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1..198
DNA (198bp) protein (66aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_5767_2
RBG_13_RIF08_66_14_curated, RIF8, Bacteria

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195..605
DNA (411bp) protein (137aa)
hypothetical protein Tax=Cloacimonetes bacterium SCGC AAA252-L05 RepID=UPI0003768B82
ExbD/TolR family biopolymer transport protein
Tax=RBG_13_RIF08_66_14_curated
PLM3-1_170_b2_sep16_scaffold_5767_3
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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602..1294
DNA (693bp) protein (231aa)
TonB family protein Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQS5_9FIRM
TonB family protein {ECO:0000313|EMBL:EAX47636.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
TonB family protein
PLM3-1_170_b2_sep16_scaffold_5767_4
unknown

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1314..2063
DNA (750bp) protein (250aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_5767_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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2362..3678
DNA (1317bp) protein (439aa)
Outer membrane macrolide efflux protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UF35_MYXSD bin=16ft_combo_ws3_JS1 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
outer membrane efflux protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_5767_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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3707..5011
DNA (1305bp) protein (435aa)
secretion protein HlyD; K02005 HlyD family secretion protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
efflux transporter, RND family, MFP subunit
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_5767_7
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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5008..5733
DNA (726bp) protein (242aa)
Macrolide export ATP-binding/permease protein MacB {ECO:0000256|HAMAP-Rule:MF_01720}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01720};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
Phosphonate-transporting ATPase Tax=unclassified Opitutaceae RepID=H1IW21_9BACT
macrolide ABC transporter ATP-binding protein
PLM3-1_170_b2_sep16_scaffold_5767_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

5730..5978
DNA (249bp) protein (83aa)
ABC efflux pump, inner membrane subunit bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b2_sep16_scaffold_5767_9
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

5951..6991
DNA (1041bp) protein (347aa)
efflux ABC transporter, macrolide exporter (MacB) family, permease protein; K02004 putative ABC transport system permease protein bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
antimicrobial peptide ABC transporter permease
Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
PLM3-1_170_b2_sep16_scaffold_5767_10
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

6995..8221
DNA (1227bp) protein (409aa)
Hypothetical conserved protein Tax=uncultured Acidobacteria bacterium RepID=H5SBT1_9BACT bin=16ft_combo_ws3_JS1 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM3-1_170_b2_sep16_scaffold_5767_11
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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8245..11118
DNA (2874bp) protein (958aa)
UvrABC system protein A Tax=Caldithrix abyssi DSM 13497 RepID=H1XXL3_9BACT bin=16ft_combo_ws3_JS1 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
excinuclease ABC subunit A
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_5767_12
unknown

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12203..12349
DNA (147bp) protein (49aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_5767_13
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12346..12732
DNA (387bp) protein (129aa)
Glycine cleavage system H protein Tax=Clostridium ultunense Esp RepID=M1ZFY8_9CLOT
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
gcvH; glycine cleavage system H protein
PLM3-1_170_b2_sep16_scaffold_5767_14
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

12768..14114
DNA (1347bp) protein (449aa)
protein GcvPA; K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
glycine dehydrogenase subunit 1 (EC:1.4.4.2)
Tax=CSP1_6_Rokubacteria
PLM3-1_170_b2_sep16_scaffold_5767_15
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

14102..15571
DNA (1470bp) protein (490aa)
glycine dehydrogenase subunit 2 (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 2 Tax=Brevibacillus RepID=GCSPB_BREBN bin=16ft_combo_ws3_JS1 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_5767_16
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

15558..16007
DNA (450bp) protein (150aa)
alias=16ft_combo_ws3_scaffold_16_77 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=BJP_IG2158_Zixibacteria_48_33
PLM3-1_170_b2_sep16_scaffold_5767_17
candidate division Zixibacteria, Bacteria

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16111..16386
DNA (276bp) protein (92aa)
Uncharacterized protein Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MHK4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EQB62546.1}; species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_5767_18
unknown

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16383..16472
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 18 items

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