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PLM3-1_170_b2_sep16_scaffold_52443

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_52443_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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230..844
DNA (615bp) protein (205aa)
Superoxide dismutase Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GKM5_9FIRM bin=16ft_combo_ws3_JS1 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
manganese/iron superoxide dismutase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_52443_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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921..1400
DNA (480bp) protein (160aa)
peroxiredoxin (EC:1.11.1.15)
Bacterioferritin comigratory protein Tax=Melioribacter roseus (strain P3M) RepID=I6Z7S6_MELRP bin=16ft_combo_ws3_JS1 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_52443_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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1484..1963
DNA (480bp) protein (160aa)
putative peptidase; K07157 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
putative peptidase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_52443_4
unknown

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1929..2093
DNA (165bp) protein (55aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_52443_5
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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comp(2118..2735)
DNA (618bp) protein (206aa)
DNA adenine methylase Tax=Magnetococcus sp. (strain MC-1) RepID=A0L749_MAGSM
DNA adenine methylase
Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
PLM3-1_170_b2_sep16_scaffold_52443_6
Marinobacter salarius, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2941..3168
DNA (228bp) protein (76aa)
HTH domain-containing protein, XRE family Tax=Dehalococcoides mccartyi RepID=M1QRE7_9CHLR
DNA-binding protein
XRE family transcriptional regulator {ECO:0000313|EMBL:AHI32635.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter salarius.;"
PLM3-1_170_b2_sep16_scaffold_52443_7
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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3165..3842
DNA (678bp) protein (226aa)
DNA methylase N-4/N-6 domain protein Tax=Magnetococcus sp. (strain MC-1) RepID=A0L750_MAGSM
DNA methylase N-4/N-6 domain-containing protein
Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
Displaying 7 items

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