ggKbase home page

PLM3-1_170_b2_sep16_scaffold_1494_9

Organism: PLM6_170_b2_sep16_Eisenbacteria_67_7

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: 6066..6791

Top 3 Functional Annotations

Value Algorithm Source
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 67.8
  • Coverage: 239.0
  • Bit_score: 329
  • Evalue 2.20e-87
ABC transporter-like protein similarity KEGG
DB: KEGG
  • Identity: 61.3
  • Coverage: 238.0
  • Bit_score: 304
  • Evalue 2.10e-80
Tax=RBG_13_RIF08_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 237.0
  • Bit_score: 315
  • Evalue 3.50e-83

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_RIF08_66_14_curated → RIF8 → Bacteria

Sequences

DNA sequence
Length: 726
ATGACCGGCCTCGTGGCGCGCGACCTCGAGCGCTACTACGGGCACTGGAAGGTCGTCGAGAAGGTCTCGATCGGCGTGGAGCGCGGCGAGGTCGTCGGCCTTCTCGGGCCGAACGGAGCCGGCAAGACGACGACGTTTCGCCTGATCGTCGGCCTGCTGCGGGCCGACGGCGGGCAGATCCTTCTCGACGGGCGCGATGTGACGCGAACTCCGATGCACGAGCGCGCGCGGATCGGACTCGGATACCTGGCCCAGGAGCCCTCGATCTTCCGCCGGCTCACGGTTCGGGAAAACATCCTCGCGATCCTCGAGACGCTGAAGCTGAAATCGAAGGAGCGGGCGCTACGGCTCGACCAGCTGCTCGAGGAGCTGAATATCGCGCCGCTCGCCGACCGGATGGGATACAACCTGTCCGGAGGAGAGCGACGCCGGGTGGAGATCACGAGAGCGCTCGTCACGCAGCCGGGATACCTGCTTCTGGACGAGCCCTTCGTGGGGATCGACCCGATCGCGGTCGCCGAGATCCAGGACATCATCTCGAGGCTGAAGTCGAAGGGTCTCGGGATCCTGATCACCGATCACAGCGTTCGGGAGACCTTGAGCACGACCGATCGCGCGTACATCATGTTCGAGGGGAAGATTCTCCTCCAAGGTACGAGCCAGGAGCTGGCGCAGGACCCTGTGGCCCGCCAGATCTACCTCGGCGAGCGTTTTCGACTGGATTGA
PROTEIN sequence
Length: 242
MTGLVARDLERYYGHWKVVEKVSIGVERGEVVGLLGPNGAGKTTTFRLIVGLLRADGGQILLDGRDVTRTPMHERARIGLGYLAQEPSIFRRLTVRENILAILETLKLKSKERALRLDQLLEELNIAPLADRMGYNLSGGERRRVEITRALVTQPGYLLLDEPFVGIDPIAVAEIQDIISRLKSKGLGILITDHSVRETLSTTDRAYIMFEGKILLQGTSQELAQDPVARQIYLGERFRLD*