name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
PLM3-1_170_b2_sep16_scaffold_1494_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria
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Not on your lists |
1..1071
|
HNH nuclease Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IGI7_ANADE bin=16ft_combo_ws3_JS1 species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
HNH nuclease
Tax=RBG_16_RIF_WS3X_71_46_curated
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PLM3-1_170_b2_sep16_scaffold_1494_2
unknown
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Not on your lists |
comp(1300..1638)
|
This feature has no annotations |
|
PLM3-1_170_b2_sep16_scaffold_1494_3
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria
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Not on your lists |
1673..1891
|
3-deoxy-manno-octulosonate cytidylyltransferase Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU41_9FIRM
3-deoxy-D-manno-octulosonate cytidylyltransferase
Tax=BJP_IG2103_Bacteroidetes_41_9
|
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PLM3-1_170_b2_sep16_scaffold_1494_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria
|
Not on your lists |
1888..2907
|
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=PYRG_CARHZ bin=16ft_combo_ws3_JS1 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
|
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PLM3-1_170_b2_sep16_scaffold_1494_5
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
2856..3512
|
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q1G2_9FIRM
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PLM3-1_170_b2_sep16_scaffold_1494_6
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
3505..4371
|
2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RH87_DESPD
Tax=RBG_13_Deltaproteobacteria_43_22_curated
|
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PLM3-1_170_b2_sep16_scaffold_1494_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
4368..5393
|
KpsF/GutQ family protein; K06041 arabinose-5-phosphate isomerase [EC:5.3.1.13] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
KpsF/GutQ family protein (EC:5.3.1.13)
Tax=GWA2_Rokubacteria_73_35_curated
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PLM3-1_170_b2_sep16_scaffold_1494_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria
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Not on your lists |
5398..6069
|
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
|
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PLM3-1_170_b2_sep16_scaffold_1494_9
RBG_13_RIF08_66_14_curated, RIF8, Bacteria
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Not on your lists |
6066..6791
|
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ABC transporter-like protein
Tax=RBG_13_RIF08_66_14_curated
|
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PLM3-1_170_b2_sep16_scaffold_1494_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria
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Not on your lists |
6804..8231
|
RNA polymerase sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U9_GEMAT bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
rpoN; RNA polymerase sigma factor
Tax=RBG_16_RIF_WS3X_71_46_curated
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PLM3-1_170_b2_sep16_scaffold_1494_11
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
8267..8803
|
Ribosomal subunit interface-associated sigma-54 modulation protein RaiA Tax=Geobacter sulfurreducens RepID=D7AJX0_GEOSK
raiA; ribosomal subunit interface-associated sigma-54 modulation protein RaiA
Ribosomal subunit interface-associated sigma-54 modulation protein RaiA {ECO:0000313|EMBL:AAR35262.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
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PLM3-1_170_b2_sep16_scaffold_1494_12
RBG_16_RIF05_58_8_curated, RIF5, Bacteria
|
Not on your lists |
8790..9641
|
HPr kinase/phosphorylase bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
HPr kinase/phosphorylase
Tax=RBG_16_RIF05_58_8_curated
|
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PLM3-1_170_b2_sep16_scaffold_1494_13
RBG_16_RIF05_58_8_curated, RIF5, Bacteria
|
Not on your lists |
9660..10052
|
PTS system fructose subfamily IIA component Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MPQ5_9BACT
PTS system mannose-specific transporter subunit IIAB
Tax=RBG_16_RIF05_58_8_curated
|
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PLM3-1_170_b2_sep16_scaffold_1494_14
GWD2_Elusimicrobia_63_28_curated, Elusimicrobia, Bacteria
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Not on your lists |
10054..10539
|
PTS system, mannose/fructose/sorbose family, IIB subunit bin=GWC2_Elusimicrobia_64_44 species=Clostridium saccharolyticum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
PTS system sorbose subfamily IIB component
Tax=GWD2_Elusimicrobia_63_28_curated
|
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PLM3-1_170_b2_sep16_scaffold_1494_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
10536..12638
|
4-alpha-glucanotransferase (EC:2.4.1.25)
Glycoside hydrolase family 57 bin=GWC2_Methylomirabilis_70_16 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWA2_Rokubacteria_73_35_curated
|
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PLM3-1_170_b2_sep16_scaffold_1494_16
unknown
|
Not on your lists |
12628..13380
|
This feature has no annotations |
|
PLM3-1_170_b2_sep16_scaffold_1494_17
Brochothrix thermosphacta, Brochothrix, Bacillales, Bacilli, Firmicutes, Bacteria
|
Not on your lists |
13377..14213
|
PTS mannose transporter subunit IID Tax=Enterobacteriaceae bacterium LSJC7 RepID=UPI00037FE0F4
PTS mannose transporter subunit IID
PTS system mannose-specific transporter subunit IID {ECO:0000313|EMBL:EUJ38797.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Brochothrix.;" source="Brochothrix thermosphacta DSM 20171 = FSL F6-1036.;"
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PLM3-1_170_b2_sep16_scaffold_1494_18
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria
|
Not on your lists |
14229..14495
|
Phosphocarrier protein HPr Tax=Geobacter metallireducens RepID=Q39W50_GEOMG bin=16ft_combo_ws3_JS1 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ptsH; phosphocarrier protein HPr
Tax=GWC2_Elusimicrobia_65_9_curated
|
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PLM3-1_170_b2_sep16_scaffold_1494_19
R_OP3X_63_14, OP3X, Bacteria
|
Not on your lists |
14492..16237
|
PtsA; phosphoenolpyruvate-protein kinase; K08483 phosphotransferase system, enzyme I, PtsI [EC:2.7.3.9] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
PtsA; phosphoenolpyruvate-protein kinase
Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
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|
PLM3-1_170_b2_sep16_scaffold_1494_20
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria
|
Not on your lists |
16234..17325
|
Bifunctional phosphoglucose/phosphomannose isomerase Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MI20_RHOM4
bifunctional phosphoglucose/phosphomannose isomerase
Bifunctional phosphoglucose/phosphomannose isomerase {ECO:0000313|EMBL:ACY48128.1}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
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PLM3-1_170_b2_sep16_scaffold_1494_21
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria
|
Not on your lists |
17322..18305
|
Glucose-1-phosphate thymidylyltransferase Tax=Pelodictyon luteolum (strain DSM 273) RepID=Q3B530_PELLD bin=16ft_combo_ws3_JS1 species=Pelodictyon luteolum genus=Pelodictyon taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
nucleotidyl transferase
Tax=RBG_16_RIF_WS3X_71_46_curated
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PLM3-1_170_b2_sep16_scaffold_1494_22
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria
|
Not on your lists |
18302..19498
|
metK; methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S-adenosylmethionine synthase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJ08_9BACT
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PLM3-1_170_b2_sep16_scaffold_1494_23
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria
|
Not on your lists |
19488..20774
|
ahcY; adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
hypothetical protein Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B4536A
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PLM3-1_170_b2_sep16_scaffold_1494_24
unknown
|
Not on your lists |
comp(20880..21299)
|
This feature has no annotations |
|
PLM3-1_170_b2_sep16_scaffold_1494_25
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria
|
Not on your lists |
21385..22926
|
DNA translocase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK73_9BACT bin=16ft_combo_ws3_JS1 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
cell division protein
Tax=RBG_16_RIF_WS3X_71_46_curated
|
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PLM3-1_170_b2_sep16_scaffold_1494_26
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria
|
Not on your lists |
23447..24253
|
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
Ribosomal protein S12 methylthiotransferase RimO Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSE3_9FIRM
ribosomal protein S12 methylthiotransferase
|
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PLM3-1_170_b2_sep16_scaffold_1494_27
unknown
|
Not on your lists |
24250..24972
|
This feature has no annotations |
|
PLM3-1_170_b2_sep16_scaffold_1494_28
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria
|
Not on your lists |
25008..25703
|
hypothetical protein bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein
Tax=RIFOXYC12_FULL_TA06_54_24_curated
|
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PLM3-1_170_b2_sep16_scaffold_1494_29
RBG_16_Zixibacteria_48_11_curated, Zixibacteria, Bacteria
|
Not on your lists |
25700..26476
|
Outer membrane assembly lipoprotein YfiO bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
outer membrane assembly lipoprotein YfiO
Tax=RBG_16_Zixibacteria_48_11_curated
|
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PLM3-1_170_b2_sep16_scaffold_1494_30
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria
|
Not on your lists |
26473..27075
|
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase Tax=Nitrolancetus hollandicus Lb RepID=I4ENK2_9CHLR
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