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PLM3-1_170_b2_sep16_scaffold_2610

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_2610_1
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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145..2424
DNA (2280bp) protein (760aa)
Glycosidase Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AFY7_IGNAJ
glycosidase
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b2_sep16_scaffold_2610_2
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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2508..2798
DNA (291bp) protein (97aa)
Putative nucleotidyltransferase bin=GWF2_Ignavibacteria_35_20 species=Aequorivita sublithincola genus=Aequorivita taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
putative nucleotidyltransferase
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
PLM3-1_170_b2_sep16_scaffold_2610_3
unknown

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2791..2913
DNA (123bp) protein (41aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2610_4
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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3214..3570
DNA (357bp) protein (119aa)
Uncharacterized protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AFY8_IGNAJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH47895.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
PLM3-1_170_b2_sep16_scaffold_2610_5
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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3613..4932
DNA (1320bp) protein (440aa)
ial:IALB_2783 hypothetical protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2610_6
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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4962..6116
DNA (1155bp) protein (385aa)
Putative permease Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ANC6_IGNAJ
permease
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2610_7
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(6100..7143)
DNA (1044bp) protein (348aa)
ial:IALB_0214 Glycosyltransferase bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
glycosyltransferase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2610_8
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(7144..8490)
DNA (1347bp) protein (449aa)
ial:IALB_0212 Putative sporulation protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
sporulation protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2610_9
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

8627..9550
DNA (924bp) protein (308aa)
Arginase family protein bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Arginase family protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2610_10
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

9584..10096
DNA (513bp) protein (171aa)
Uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2610_11
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(10141..11172)
DNA (1032bp) protein (344aa)
Uncharacterized protein Tax=Melioribacter roseus (strain P3M) RepID=I6ZY82_MELRP
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2610_12
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(11322..11696)
DNA (375bp) protein (125aa)
ECF subfamily RNA polymerase sigma-70 factor Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AG13_IGNAJ
rpoE; ECF subfamily RNA polymerase sigma-70 factor
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2610_13
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

11785..12273
DNA (489bp) protein (163aa)
Alanine--tRNA ligase Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AFJ2_IGNAJ
Suspect SCG annotation. See neighboring gene [PLM3-1_170_b2_sep16_scaffold_2610_14].
alaS; alanyl-tRNA synthetase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2610_14
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists


12302..14218
DNA (1917bp) protein (639aa)
Alanine--tRNA ligase bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
alaS; alanyl-tRNA synthetase
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
PLM3-1_170_b2_sep16_scaffold_2610_15
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

14241..14570
DNA (330bp) protein (110aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036F37ED
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2610_16
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

14570..15922
DNA (1353bp) protein (451aa)
DNA repair protein radA bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
DNA repair protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2610_17
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

16052..16303
DNA (252bp) protein (84aa)
RRM domain RNA-binding protein bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
RRM domain RNA-binding protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2610_18
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(16379..17287)
DNA (909bp) protein (303aa)
ial:IALB_3051 hypothetical protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2610_19
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(17440..18726)
DNA (1287bp) protein (429aa)
Uncharacterized protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AP47_IGNAJ
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b2_sep16_scaffold_2610_20
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

18865..19413
DNA (549bp) protein (183aa)
hypothetical protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
Displaying 20 items

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