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PLM3-1_170_b2_sep16_scaffold_17312

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_17312_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(1..516)
DNA (516bp) protein (172aa)
Peptide ABC transporter permease protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter permease
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3-1_170_b2_sep16_scaffold_17312_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(482..1432)
DNA (951bp) protein (317aa)
Peptide ABC transporter permease protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter permease
Tax=GWA2_Rokubacteria_70_23_curated
PLM3-1_170_b2_sep16_scaffold_17312_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(1519..3018)
DNA (1500bp) protein (500aa)
ABC transporter peptide-binding protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter substrate-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3-1_170_b2_sep16_scaffold_17312_4
R_NC10_66_22, NC10, Bacteria

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comp(3056..3337)
DNA (282bp) protein (94aa)
phosphocarrier protein HPr Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036ACC5C
phosphocarrier protein HPr
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_17312_5
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(3487..3921)
DNA (435bp) protein (145aa)
Pts system fructose IIA component bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
PTS system fructose subfamily transporter subunit IIA
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_17312_6
R_NC10_66_22, NC10, Bacteria

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comp(4212..4595)
DNA (384bp) protein (128aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
putative P-loop-containing kinase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_17312_7
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(4538..4981)
DNA (444bp) protein (148aa)
glmZ(sRNA)-inactivating NTPase Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI000366AC44
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_17312_8
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(5069..5656)
DNA (588bp) protein (196aa)
HPr kinase/phosphorylase Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IM88_ANADE
HPr kinase/phosphorylase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_17312_9
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(5662..6189)
DNA (528bp) protein (176aa)
protein DR_1082 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
protein DR_1082
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_17312_10
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(6307..7743)
DNA (1437bp) protein (479aa)
rpoN; RNA polymerase sigma-54 factor bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
rpoN; RNA polymerase sigma-54 factor
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_17312_11
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(7764..8036)
DNA (273bp) protein (91aa)
Putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily Tax=Candidatus Methylomirabilis oxyfera RepID=D5MES0_9BACT
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying 11 items

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