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PLM3-1_170_b2_sep16_scaffold_3794

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_3794_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2..568)
DNA (567bp) protein (189aa)
Putative cobalamin (Vitamin B12) biosynthesis CbiX protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IID0_NITGG
cobalamin (vitamin B12) biosynthesis CbiX protein
Putative cobalamin (Vitamin B12) biosynthesis CbiX protein {ECO:0000313|EMBL:AFU58733.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_3794_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(561..1646)
DNA (1086bp) protein (362aa)
Cobalamin biosynthesis protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IK96_NITGG
cbiG; cobalamin biosynthesis protein
Cobalamin biosynthesis protein {ECO:0000313|EMBL:AFU58737.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_3794_3
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(2048..2320)
DNA (273bp) protein (91aa)
UPF0218 protein NKOR_06995 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B8F5_9ARCH
hypothetical protein
UPF0218 protein NKOR_06995 {ECO:0000256|HAMAP-Rule:MF_00590}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensis AR1.;"
PLM3-1_170_b2_sep16_scaffold_3794_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2304..3410)
DNA (1107bp) protein (369aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKA7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58772.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_3794_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3529..4128
DNA (600bp) protein (200aa)
rpoE`; DNA-directed RNA polymerase, subunit E` (EC:2.7.7.6)
DNA-directed RNA polymerase, subunit E {ECO:0000313|EMBL:AFU58775.1}; EC=2.7.7.6 {ECO:0000313|EMBL:AFU58775.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
DNA-directed RNA polymerase, subunit E Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IG60_NITGG
PLM3-1_170_b2_sep16_scaffold_3794_6
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4129..4317
DNA (189bp) protein (63aa)
rpoE''; DNA-directed RNA polymerase, subunit E`` (EC:2.7.7.6)
Transcription elongation factor Spt4 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBW1_NITGG
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_3794_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4314..5192
DNA (879bp) protein (293aa)
nadC; nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase [carboxylating] {ECO:0000256|PIRNR:PIRNR006250}; EC=2.4.2.19 {ECO:0000256|PIRNR:PIRNR006250};; Quinolinate phosphoribosyltransferase [decarboxylating] {ECO:0000256|PIRNR:PIRNR006250}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Nicotinate-nucleotide pyrophosphorylase [carboxylating] Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKA8_NITGG
PLM3-1_170_b2_sep16_scaffold_3794_8
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5226..6176)
DNA (951bp) protein (317aa)
quinolinate synthetase (EC:2.5.1.72)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Quinolinate synthase A Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIF0_NITGG
PLM3-1_170_b2_sep16_scaffold_3794_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6345..6527
DNA (183bp) protein (61aa)
30S ribosomal protein S30e Tax=Candidatus Nitrososphaera gargensis RepID=K0IN54_NITGG
rps30e; 30S ribosomal protein S30e
30S ribosomal protein S30e {ECO:0000313|EMBL:AFU58779.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_3794_10
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6632..7465
DNA (834bp) protein (278aa)
aspartate dehydrogenase (EC:1.4.1.21)
Probable L-aspartate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01265}; EC=1.4.1.21 {ECO:0000256|HAMAP-Rule:MF_01265};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
L-aspartate dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IG64_NITGG
PLM3-1_170_b2_sep16_scaffold_3794_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7493..7825
DNA (333bp) protein (111aa)
TRAM domain-containing protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBW5_NITGG
TRAM domain-containing protein
TRAM domain-containing protein {ECO:0000313|EMBL:AFU58781.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_3794_12
RBG_16_OP11_Woesebacteria_42_24_curated, Woesebacteria, Microgenomates, Bacteria

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7952..8332
DNA (381bp) protein (127aa)
heme/copper-type cytochrome/quinol oxidases, subunit 2
Tax=RBG_16_OP11_Woesebacteria_42_24_curated
PLM3-1_170_b2_sep16_scaffold_3794_13
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8929..9252
DNA (324bp) protein (108aa)
50S ribosomal protein L31e Tax=Candidatus Nitrososphaera gargensis RepID=K0IJ55_NITGG
ribosomal protein L31E
50S ribosomal protein L31e {ECO:0000256|HAMAP-Rule:MF_00410}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_3794_14
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9357..10136)
DNA (780bp) protein (260aa)
ftsZ; cell division protein FtsZ
Cell division protein FtsZ {ECO:0000313|EMBL:AIC15326.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
tubulin/FtsZ GTPase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
PLM3-1_170_b2_sep16_scaffold_3794_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10477..11625)
DNA (1149bp) protein (383aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH81_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58213.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_3794_16
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(11733..13082)
DNA (1350bp) protein (450aa)
glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
Glutamate-1-semialdehyde aminotransferase {ECO:0000313|EMBL:AIF83514.1}; EC=5.4.3.8 {ECO:0000313|EMBL:AIF83514.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Glutamate-1-semialdehyde 2,1-aminomutase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEP2_NITGG
Displaying 16 items

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