ggKbase home page

PLM3-1_170_b2_sep16_scaffold_15451

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_15451_1
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

395..1171
DNA (777bp) protein (259aa)
Uncharacterized protein Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D1H8_9ARCH
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:AIF83490.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_15451_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

1294..1896
DNA (603bp) protein (201aa)
aroD; 3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HAMAP-Rule:MF_00214}; Type I dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
3-dehydroquinate dehydratase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IB60_NITGG
PLM3-1_170_b2_sep16_scaffold_15451_3
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

1893..2738
DNA (846bp) protein (282aa)
aroE; shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJW7_NITGG
Tax=RBG_13_Bathyarchaeota_38_9_curated
PLM3-1_170_b2_sep16_scaffold_15451_4
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

2735..3589
DNA (855bp) protein (285aa)
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00370}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00370};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00370};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Shikimate kinase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHZ8_NITGG
PLM3-1_170_b2_sep16_scaffold_15451_5
unknown

Not on your lists

comp(3653..3751)
DNA (99bp) protein (33aa)

This feature has no annotations

Displaying 5 items

View Taxonomy