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PLM3-1_170_b2_sep16_scaffold_26984

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_26984_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(51..311)
DNA (261bp) protein (87aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN37_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58694.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_26984_2
unknown

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comp(457..774)
DNA (318bp) protein (106aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_26984_trna_2
unknown

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comp(1003..1077)
DNA (75bp)
transferRNA Thr
PLM3-1_170_b2_sep16_scaffold_26984_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1339..1608
DNA (270bp) protein (90aa)
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formylglycinamide ribonucleotide amidotransferase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; Phosphoribosylformylglycinamidine synthase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative phosphoribosylformylglycinamidine synthase PurS Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFC8_NITGG
purS; phosphoribosylformylglycinamidine synthase PurS
PLM3-1_170_b2_sep16_scaffold_26984_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1661..3574)
DNA (1914bp) protein (638aa)
argS; arginine--tRNA ligase (EC:6.1.1.19)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Arginine--tRNA ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM12_NITGG
PLM3-1_170_b2_sep16_scaffold_26984_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3578..3976)
DNA (399bp) protein (133aa)
phosphoglycolate phosphatase (EC:3.1.3.18)
Phosphoglycolate phosphatase {ECO:0000256|HAMAP-Rule:MF_01419}; Short=PGP {ECO:0000256|HAMAP-Rule:MF_01419};; Short=PGPase {ECO:0000256|HAMAP-Rule:MF_01419};; EC=3.1.3.18 {ECO:0000256|HAMAP-Rule:MF_01419};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Phosphoglycolate phosphatase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IF98_NITGG
PLM3-1_170_b2_sep16_scaffold_26984_trna_1
unknown

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4523..4611
DNA (89bp)
transferRNA SeC
PLM3-1_170_b2_sep16_scaffold_26984_6
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4686..5057
DNA (372bp) protein (124aa)
30S ribosomal protein S24e Tax=uncultured archaeon RepID=I3RKL5_9ARCH
rps24e; putative 30S ribosomal protein S24e
Putative 30S ribosomal protein S24e {ECO:0000313|EMBL:AIC15857.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_26984_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5073..5258
DNA (186bp) protein (62aa)
30S ribosomal protein S27ae Tax=Candidatus Nitrososphaera gargensis RepID=K0INM2_NITGG
rps27ae; 30S ribosomal protein S27ae
30S ribosomal protein S27ae {ECO:0000256|HAMAP-Rule:MF_00777}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_26984_8
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5330..5506)
DNA (177bp) protein (59aa)
putative pseudouridylate synthase (EC:5.4.99.-)
Putative pseudouridylate synthase {ECO:0000313|EMBL:AIF82855.1}; EC=5.4.99.- {ECO:0000313|EMBL:AIF82855.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Displaying 10 items

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