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PLM3-1_170_b2_sep16_scaffold_4640

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_4640_1
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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1..864
DNA (864bp) protein (288aa)
Sugar phosphate permease Tax=Bradyrhizobium sp. YR681 RepID=J2VPR1_9BRAD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_4640_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

932..1924
DNA (993bp) protein (331aa)
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase bin=GWC2_Methylomirabilis_70_16 species=Saccharomonospora marina genus=Saccharomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
5,10-methylene tetrahydromethanopterin reductase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_4640_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2058..2948
DNA (891bp) protein (297aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_4640_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3302..3892
DNA (591bp) protein (197aa)
peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_4640_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3919..4671
DNA (753bp) protein (251aa)
Sir2 family protein bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
sir2 family protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_4640_6
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4719..5141
DNA (423bp) protein (141aa)
Uncharacterized protein Tax=Phaeospirillum fulvum MGU-K5 RepID=S9SH31_PHAFV
Uncharacterized protein {ECO:0000313|EMBL:EPY03433.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K5.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_4640_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5450..6466)
DNA (1017bp) protein (339aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4Y2V3_SORCE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_4640_8
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6484..6930)
DNA (447bp) protein (149aa)
Uncharacterized protein Tax=Nocardia brasiliensis ATCC 700358 RepID=K0ES01_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:GAJ81778.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis NBRC 14402.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_4640_9
unknown

Not on your lists

7037..7159
DNA (123bp) protein (41aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_4640_10
unknown

Not on your lists

7191..7400
DNA (210bp) protein (70aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_4640_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7518..8468)
DNA (951bp) protein (317aa)
Bll1368 protein bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_4640_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8691..9482)
DNA (792bp) protein (264aa)
Isochorismatase hydrolase bin=GWD2_Deltaproteobacteria_55_8 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_4640_13
RLO_PLX_64_10, Bacteria

Not on your lists

comp(9662..9862)
DNA (201bp) protein (67aa)
Putative uncharacterized protein Tax=Beggiatoa sp. PS RepID=A7BZ93_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_170_b2_sep16_scaffold_4640_14
RLO_PLX_64_10, Bacteria

Not on your lists

comp(9864..10337)
DNA (474bp) protein (158aa)
Uncharacterized protein Tax=Gloeocapsa sp. PCC 73106 RepID=L8LT32_9CHRO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_170_b2_sep16_scaffold_4640_15
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10787..11302
DNA (516bp) protein (172aa)
3-hydroxybutyryl-CoA dehydratase Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026284C5
3-hydroxybutyryl-CoA dehydratase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_4640_16
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11499..12371
DNA (873bp) protein (291aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_4640_17
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12368..13234
DNA (867bp) protein (289aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Displaying 17 items

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