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PLM3-1_170_b2_sep16_scaffold_3832

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_3832_1
unknown

Not on your lists

comp(1..90)
DNA (90bp) protein (30aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_3832_2
RBG_16_Armatimonadetes_58_9_curated, Armatimonadetes, Bacteria

Not on your lists

618..908
DNA (291bp) protein (97aa)
DNA polymerase, beta domain protein region Tax=Roseiflexus sp. (strain RS-1) RepID=A5UYW2_ROSS1
DNA polymerase subunit beta
Tax=RBG_16_Armatimonadetes_58_9_curated
PLM3-1_170_b2_sep16_scaffold_3832_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

968..1192
DNA (225bp) protein (75aa)
id=1763907 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_3832_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1734..2129
DNA (396bp) protein (132aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_3832_5
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

2273..2518
DNA (246bp) protein (82aa)
hypothetical protein bin=RBG_19FT_COMBO_GAL15_69_19 species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
PLM3-1_170_b2_sep16_scaffold_3832_6
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2904..3482)
DNA (579bp) protein (193aa)
Uncharacterized protein Tax=Sphingomonas sp. LH128 RepID=J8VR90_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJU10563.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
Glcg protein
PLM3-1_170_b2_sep16_scaffold_3832_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3532..3822)
DNA (291bp) protein (97aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_3832_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4009..4587)
DNA (579bp) protein (193aa)
OmpA/MotB domain protein bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
peptidoglycan-associated lipoprotein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_3832_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

4937..5776
DNA (840bp) protein (280aa)
Uncharacterized protein Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YX01_METPS
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3-1_170_b2_sep16_scaffold_3832_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5847..6701)
DNA (855bp) protein (285aa)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI00037AAB64
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_3832_11
unknown

Not on your lists

6820..7002
DNA (183bp) protein (61aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_3832_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6948..7289)
DNA (342bp) protein (114aa)
prevent-host-death protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
prevent-host-death protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_3832_13
unknown

Not on your lists

comp(7286..7525)
DNA (240bp) protein (80aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_3832_14
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7566..8429)
DNA (864bp) protein (288aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Salinisphaera shabanensis genus=Salinisphaera taxon_order=Salinisphaerales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
transposase
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_3832_15
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8631..8876)
DNA (246bp) protein (82aa)
Uncharacterized protein Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SRL3_9DELT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_3832_16
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8995..9234)
DNA (240bp) protein (80aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_3832_17
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9670..10839
DNA (1170bp) protein (390aa)
BNR/Asp-box repeat protein Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A226_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3-1_170_b2_sep16_scaffold_3832_18
R_OD1_Giovannonibacteria_44_11, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

10977..13523
DNA (2547bp) protein (849aa)
putative peptidase M1, membrane alanine aminopeptidase (EC:3.4.11.2)
Putative Peptidase M1, membrane alanine aminopeptidase bin=GWF2_Methylomirabilis_70_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPHIGHO2_02_FULL_OD1_Giovannonibacteria_44_11_curated
PLM3-1_170_b2_sep16_scaffold_3832_19
Xenococcus sp. PCC 7305, Xenococcus, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(13582..15045)
DNA (1464bp) protein (488aa)
deoxyhypusine synthase (EC:2.5.1.46)
Deoxyhypusine synthase Tax=Xenococcus sp. PCC 7305 RepID=L8M6N6_9CYAN
Deoxyhypusine synthase {ECO:0000313|EMBL:ELS03887.1}; species="Bacteria; Cyanobacteria; Pleurocapsales; Xenococcus.;" source="Xenococcus sp. PCC 7305.;"
Displaying 19 items

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