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PLM3-1_170_b2_sep16_scaffold_2123

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_2123_1
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..746)
DNA (744bp) protein (248aa)
Zn-dependent hydrolase including glyoxylases /Rhodanese-related sulfurtransferase bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Cycloclasticus taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Zn-dependent hydrolase including glyoxylases/Rhodanese-related sulfurtransferase
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_2123_2
unknown

Not on your lists

comp(728..928)
DNA (201bp) protein (67aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2123_3
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1075..1836
DNA (762bp) protein (254aa)
Maleate cis-trans isomerase bin=GWC2_Syntrophus__56_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM3-1_170_b2_sep16_scaffold_2123_4
unknown

Not on your lists

comp(1991..2161)
DNA (171bp) protein (57aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2123_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2348..2998)
DNA (651bp) protein (217aa)
id=2090298 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_2123_6
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

Not on your lists

3177..4265
DNA (1089bp) protein (363aa)
mandelate racemase/muconate lactonizing protein bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=RBG_13_Bathyarchaeota_52_12_curated
PLM3-1_170_b2_sep16_scaffold_2123_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4329..5372
DNA (1044bp) protein (348aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Bradyrhizobium sp. CCGE-LA001 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_2123_8
unknown

Not on your lists

comp(5431..5529)
DNA (99bp) protein (33aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2123_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5526..5675)
DNA (150bp) protein (50aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_2123_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6079..6888
DNA (810bp) protein (270aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Bradyrhizobium sp. CCGE-LA001 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_2123_11
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6941..7342)
DNA (402bp) protein (134aa)
Putative uncharacterized protein Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IF53_ACIB4
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_2123_12

Not on your lists

7774..8016
DNA (243bp) protein (81aa)
ABC transporter substrate binding protein {ECO:0000313|EMBL:AIA12495.1}; Flags: Fragment;; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_2123_13
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8013..8987
DNA (975bp) protein (325aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_2123_14
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9178..9483)
DNA (306bp) protein (102aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_2123_15
Methylococcaceae bacterium Sn10-6, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9519..11090
DNA (1572bp) protein (524aa)
hypothetical protein Tax=Lewinella cohaerens RepID=UPI000380B98A
Uncharacterized protein {ECO:0000313|EMBL:KJV05934.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae.;" source="Methylococcaceae bacterium Sn10-6.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_2123_16
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

11127..12401
DNA (1275bp) protein (425aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037E5BE6
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3-1_170_b2_sep16_scaffold_2123_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

12413..13969
DNA (1557bp) protein (519aa)
High-affinity nickel-transporter Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2JAZ6_NOSP7
high-affinity nickel-transporter
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_170_b2_sep16_scaffold_2123_18
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14104..15087)
DNA (984bp) protein (328aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
NMT1/THI5 like domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_2123_19
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15273..15977)
DNA (705bp) protein (235aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037B4483
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_2123_20
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15974..16129)
DNA (156bp) protein (52aa)
Citrate utilization protein B bin=GWC2_Methylomirabilis_70_16 species=Rhizobium sp. genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
citB; citrate utilization protein B
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 20 items

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