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PLM3-1_170_b2_sep16_scaffold_2221

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_2221_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1506)
DNA (1506bp) protein (502aa)
Lon protease Tax=Azospirillum brasilense Sp245 RepID=G8APV8_AZOBR
DNA-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_2221_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1503..1934)
DNA (432bp) protein (144aa)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI000306532C
hsp20/alpha crystallin family protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_2221_3
unknown

Not on your lists

2110..2232
DNA (123bp) protein (41aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2221_4
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2414..2803
DNA (390bp) protein (130aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_2221_5
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2929..3612
DNA (684bp) protein (228aa)
Transcriptional regulator, Crp/Fnr family Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PXQ6_CATAD
Crp/Fnr family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_2221_6
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

3744..4775
DNA (1032bp) protein (344aa)
hypothetical protein Tax=Methylovulum miyakonense RepID=UPI00036B8397
fatty acid desaturase
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
PLM3-1_170_b2_sep16_scaffold_2221_7
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4935..5255
DNA (321bp) protein (107aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_2221_8
unknown

Not on your lists

5286..5567
DNA (282bp) protein (94aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2221_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5820..6800
DNA (981bp) protein (327aa)
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha (EC:1.2.4.1)
Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RZX5_THEOJ
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_2221_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6793..7818
DNA (1026bp) protein (342aa)
putative 2-oxoisovalerate dehydrogenase subunit beta (EC:1.2.4.4)
TPP-dependent acetoin dehydrogenase complex, E1 protein subunit beta Tax=Chelatococcus sp. GW1 RepID=UPI0002D389E0
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_2221_11
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7824..8444)
DNA (621bp) protein (207aa)
Glutathione S-transferase Tax=Roseibium sp. TrichSKD4 RepID=E2CH09_9RHOB
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_2221_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8610..8996
DNA (387bp) protein (129aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_2221_13
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9113..9403
DNA (291bp) protein (97aa)
10 kDa chaperonin Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I8T2_RHOVT
chaperonin Cpn10
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_2221_14
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9418..10101
DNA (684bp) protein (228aa)
60 kDa chaperonin 2 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
groL2; 60 kda chaperonin, groel protein 2
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_2221_15
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10085..11068
DNA (984bp) protein (328aa)
60 kDa chaperonin 2 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
groEL; chaperonin GroEL
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_2221_16
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(11213..11659)
DNA (447bp) protein (149aa)
Heat shock protein Hsp20 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Heat shock protein Hsp20
Tax=CSP1_5_NC10
PLM3-1_170_b2_sep16_scaffold_2221_17
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11806..12942
DNA (1137bp) protein (379aa)
DegP2 peptidase bin=GWA2_Elusimicrobia_69_24 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
DegP2 peptidase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_2221_18
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13075..14100)
DNA (1026bp) protein (342aa)
PhoH family protein bin=GWD2_Deltaproteobacteria_55_8 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
PhoH family protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_2221_19
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14097..14522)
DNA (426bp) protein (142aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Methanocella paludicola genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_2221_20
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14522..17161)
DNA (2640bp) protein (880aa)
Alanine--tRNA ligase bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
alaS; alanyl-tRNA ligase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_2221_21
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17168..17368)
DNA (201bp) protein (67aa)
Regulatory protein RecX bin=GWD2_Deltaproteobacteria_55_8 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_2221_22
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(17685..18626)
DNA (942bp) protein (314aa)
Protein RecA bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
recA protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
Displaying 22 items

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