ggKbase home page

PLM3-1_170_b2_sep16_scaffold_2953

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_2953_1
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..927
DNA (927bp) protein (309aa)
Uncharacterized protein Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J516_NOSP7
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_2953_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1189..2352
DNA (1164bp) protein (388aa)
UPF0272 protein Sfum_2531 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=Y2531_SYNFM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_2953_3
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2373..3632
DNA (1260bp) protein (420aa)
Major facilitator superfamily MFS_1 bin=GWD2_Deltaproteobacteria_55_8 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
major facilitator superfamily protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_2953_4
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3678..4256)
DNA (579bp) protein (193aa)
Adenylate cyclase 2 Tax=Paenibacillus alvei DSM 29 RepID=K4Z8I6_PAEAL
Uncharacterized protein {ECO:0000313|EMBL:KJS46862.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
GAF sensor-containing adenylate/guanylate cyclase
PLM3-1_170_b2_sep16_scaffold_2953_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4623..5594)
DNA (972bp) protein (324aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein bin=GWD2_CPR2_39_7 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
NMT1/THI5 like domain protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_2953_6
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5629..6345)
DNA (717bp) protein (239aa)
bioD; dethiobiotin synthetase (EC:6.3.3.3)
ATP-dependent dethiobiotin synthetase BioD Tax=Nitrolancetus hollandicus Lb RepID=I4EH99_9CHLR
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
PLM3-1_170_b2_sep16_scaffold_2953_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6437..7795)
DNA (1359bp) protein (453aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TF31_HELMI
bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_2953_8

Not on your lists

comp(7813..8751)
DNA (939bp) protein (313aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM24874.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein bin=bin1_lowGC species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_2953_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8833..9483)
DNA (651bp) protein (217aa)
8-amino-7-oxononanoate synthase bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
8-amino-7-oxononanoate synthase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 9 items

View Taxonomy