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PLM3-1_170_b2_sep16_scaffold_42

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_42_1
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..206
DNA (204bp) protein (68aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_42_2
Lyngbya confervoides, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(508..2301)
DNA (1794bp) protein (598aa)
Putative uncharacterized protein Tax=Microcystis aeruginosa (strain NIES-843) RepID=B0JFG0_MICAN
Uncharacterized protein {ECO:0000313|EMBL:KIF41349.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya confervoides BDU141951.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_42_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2463..3905)
DNA (1443bp) protein (481aa)
Amidophosphoribosyltransferase bin=GWC2_Deltaproteobacteria_56_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
amidophosphoribosyltransferase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_42_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3961..6195)
DNA (2235bp) protein (745aa)
purL; phosphoribosylformylglycinamidine synthase subunit PurL (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 2 bin=GWB2_Deltaproteobacteria_65_81 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_42_5
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6188..6898)
DNA (711bp) protein (237aa)
Phosphoribosylformylglycinamidine synthase 1 Tax=uncultured Acidobacteria bacterium RepID=H5SIT5_9BACT
phosphoribosylformylglycinamidine synthase I
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_42_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7037..7279)
DNA (243bp) protein (81aa)
purS; phosphoribosylformylglycinamidine synthase (PurS) (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] bin=GWC2_NOV_55_46 species=Paenibacillus polymyxa genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_NOV_55_46 organism_group=Proteobacteria
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_42_7
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7487..8779)
DNA (1293bp) protein (431aa)
Adenylosuccinate lyase bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
adenylosuccinate lyase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_42_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8874..9302)
DNA (429bp) protein (143aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Dut; dUTPase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_42_9
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9653..10930)
DNA (1278bp) protein (426aa)
Zinc-dependent peptidase, M16 family bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
peptidase M16 domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_42_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10960..13065)
DNA (2106bp) protein (702aa)
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_42_11
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13131..13400)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
30S ribosomal protein S15
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_42_12
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13579..14184
DNA (606bp) protein (202aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative peptidase A2A
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_42_13
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(14379..14891)
DNA (513bp) protein (171aa)
hypothetical protein Tax=Thioalkalivibrio RepID=UPI00035CDE4C
hypothetical protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
PLM3-1_170_b2_sep16_scaffold_42_14
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15514..16302)
DNA (789bp) protein (263aa)
hypothetical protein Tax=Calothrix sp. PCC 7103 RepID=UPI0002EEB136
Uncharacterized protein {ECO:0000313|EMBL:EWS65880.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
PLM3-1_170_b2_sep16_scaffold_42_15
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16590..17360)
DNA (771bp) protein (257aa)
Putative transcriptional regulator bin=GWB2_Pelobacter_53_15 species=Methanosphaerula palustris genus=Methanosphaerula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
PLM3-1_170_b2_sep16_scaffold_42_16
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17377..17526
DNA (150bp) protein (50aa)
Electron transfer flavoprotein alpha subunit Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S015_FERPA
electron transfer flavoprotein subunit alpha
Tax=RBG_13_Deltaproteobacteria_53_10_curated
PLM3-1_170_b2_sep16_scaffold_42_17
Microcystis sp. T1-4, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(17601..18182)
DNA (582bp) protein (194aa)
Uncharacterized protein Tax=Microcystis sp. T1-4 RepID=I4I8N1_9CHRO
Uncharacterized protein {ECO:0000313|EMBL:CCI30655.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis sp. T1-4.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_42_18
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18830..21508)
DNA (2679bp) protein (893aa)
Type III restriction enzyme, res subunit, putative Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IQ08_RHOCS
type III restriction enzyme, res subunit
Type III restriction enzyme, res subunit, putative {ECO:0000313|EMBL:ACI97544.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
PLM3-1_170_b2_sep16_scaffold_42_19
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(21505..22731)
DNA (1227bp) protein (409aa)
Putative uncharacterized protein Tax=Variovorax paradoxus (strain S110) RepID=C5CJB4_VARPS
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_42_20
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23150..23332)
DNA (183bp) protein (61aa)
ATP-dependent protease La (EC:3.4.21.53)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035DDBD9
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
PLM3-1_170_b2_sep16_scaffold_42_21
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23417..26227)
DNA (2811bp) protein (937aa)
Uncharacterized protein Tax=Bacillus cereus BAG6O-2 RepID=J9A362_BACCE
Helicase {ECO:0000313|EMBL:KGE09831.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
prophage LambdaMc01, SNF2 family helicase
PLM3-1_170_b2_sep16_scaffold_42_22
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26242..26766)
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=Escherichia coli KTE29 RepID=L4AJ67_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KGE09830.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
PLM3-1_170_b2_sep16_scaffold_42_23
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26773..30045)
DNA (3273bp) protein (1091aa)
Uncharacterized protein Tax=Pseudomonas stutzeri KOS6 RepID=K6D2F9_PSEST
Uncharacterized protein {ECO:0000313|EMBL:KGE09829.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_42_24
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

comp(30049..30819)
DNA (771bp) protein (257aa)
Uncharacterized protein Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PMI4_MURRD
hypothetical protein
Tax=CG_Arma_02
PLM3-1_170_b2_sep16_scaffold_42_25
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(30822..31310)
DNA (489bp) protein (163aa)
Uncharacterized protein Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PMI5_MURRD
hypothetical protein
Tax=CG_Arma_01
PLM3-1_170_b2_sep16_scaffold_42_26
Pantoea stewartii, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31320..32315)
DNA (996bp) protein (332aa)
hypothetical protein Tax=Prochlorothrix hollandica RepID=UPI0003490E42
Alkaline phosphatase {ECO:0000313|EMBL:KHN62999.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea stewartii.;"
putative uncharacterized protein
PLM3-1_170_b2_sep16_scaffold_42_27
R_Gammaproteobacteria_57_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32312..34993)
DNA (2682bp) protein (894aa)
Uncharacterized protein Tax=Betaproteobacteria bacterium MOLA814 RepID=V4Y278_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated
PLM3-1_170_b2_sep16_scaffold_42_28
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35353..38124)
DNA (2772bp) protein (924aa)
vitamin B12-dependent ribonucleotide reductase (EC:1.17.4.1)
Ribonucleotide reductase of class II (Coenzyme B12-dependent) bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_42_29
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38460..38933
DNA (474bp) protein (158aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_42_30
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38991..39875)
DNA (885bp) protein (295aa)
Methyltransferase bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
SAM-dependent methyltransferase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Displaying items 1-30 of 52 in total

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