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PLM3-1_170_b2_sep16_scaffold_576

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_576_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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1..1140
DNA (1140bp) protein (380aa)
D-lactate dehydrogenase (EC:1.1.2.4)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Bacillus sp. 2_A_57_CT2 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_576_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1291..2088
DNA (798bp) protein (266aa)
id=2104314 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_576_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2194..3240
DNA (1047bp) protein (349aa)
O-methyltransferase 2 bin=GWD2_Deltaproteobacteria_55_8 species=Streptomyces acidiscabies genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_576_4
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3678..3950
DNA (273bp) protein (91aa)
hypothetical protein Tax=Gemmata obscuriglobus RepID=UPI00016C4768
Uncharacterized protein {ECO:0000313|EMBL:ETX03566.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
PLM3-1_170_b2_sep16_scaffold_576_5
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3950..4348
DNA (399bp) protein (133aa)
hypothetical protein Tax=Gemmata obscuriglobus RepID=UPI00016C4767
Uncharacterized protein {ECO:0000313|EMBL:ETX03565.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
restriction endonuclease
PLM3-1_170_b2_sep16_scaffold_576_6
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4924..5217
DNA (294bp) protein (98aa)
rRNA methyltransferase Tax=Sphingobium yanoikuyae RepID=UPI000262BB86
Excinuclease ABC subunit C {ECO:0000313|EMBL:ESZ85574.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
tRNA/rRNA methyltransferase
PLM3-1_170_b2_sep16_scaffold_576_7
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5976..6356
DNA (381bp) protein (127aa)
hypothetical protein Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B5312B
Uncharacterized protein {ECO:0000313|EMBL:ETW94714.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM3-1_170_b2_sep16_scaffold_576_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7396..8787
DNA (1392bp) protein (464aa)
Phosphoesterase, RecJ domain protein bin=GWF2_Methylomirabilis_70_14 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TrkA-N domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_576_9
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8793..9209
DNA (417bp) protein (139aa)
Hypothetical cytosolic protein bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_576_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9295..10746
DNA (1452bp) protein (484aa)
tRNA-splicing ligase RtcB Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003AA0E27
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_576_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10929..11285
DNA (357bp) protein (119aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_576_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11337..11729
DNA (393bp) protein (131aa)
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_576_13
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11739..12764
DNA (1026bp) protein (342aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein bin=GWD2_Deltaproteobacteria_55_8 species=Pseudomonas stutzeri genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_576_14
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12810..14279
DNA (1470bp) protein (490aa)
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3S0_SPHTD
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
Tax=RBG_13_Deltaproteobacteria_53_10_curated
PLM3-1_170_b2_sep16_scaffold_576_15
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14342..15418
DNA (1077bp) protein (359aa)
UPI0002776920 related cluster bin=GWD2_Deltaproteobacteria_55_8 species=Marinobacter sp. BSs20148 genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_576_16
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15636..15824
DNA (189bp) protein (63aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_576_17
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16024..16626)
DNA (603bp) protein (201aa)
methylmalonyl-CoA mutase, N-terminal:methylmalonyl-CoA mutase, C-terminal (EC:5.4.99.2)
Methylmalonyl-CoA mutase Tax=Cupriavidus sp. HMR-1 RepID=L2EMW5_9BURK
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3-1_170_b2_sep16_scaffold_576_18
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16745..17035)
DNA (291bp) protein (97aa)
Heavy metal translocating P-type ATPase Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F1L8_9PROT
heavy metal translocating P-type ATPase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3-1_170_b2_sep16_scaffold_576_19
unknown

Not on your lists

comp(18045..18149)
DNA (105bp) protein (35aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_576_20
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18146..18652)
DNA (507bp) protein (169aa)
Uncharacterized protein Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TUA4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ERK89034.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_576_21
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18758..18979
DNA (222bp) protein (74aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI0003719EAB
RND efflux system, outer membrane lipoprotein, NodT family
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:BAL24883.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
Displaying 21 items

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