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PLM3-1_170_b2_sep16_scaffold_605

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_605_1
unknown

Not on your lists

comp(799..1179)
DNA (381bp) protein (127aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_605_2
unknown

Not on your lists

comp(1217..1480)
DNA (264bp) protein (88aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_605_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1639..2640)
DNA (1002bp) protein (334aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase, type I Tax=gamma proteobacterium NOR5-3 RepID=B8KI40_9GAMM
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_605_4
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2637..3656)
DNA (1020bp) protein (340aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain protein Tax=marine gamma proteobacterium HTCC2148 RepID=B7RYI2_9GAMM
Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain protein {ECO:0000313|EMBL:EEB78634.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2148.;"
PLM3-1_170_b2_sep16_scaffold_605_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3866..4951
DNA (1086bp) protein (362aa)
UPI0002776920 related cluster bin=GWD2_Deltaproteobacteria_55_8 species=Marinobacter sp. BSs20148 genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_605_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4970..6001
DNA (1032bp) protein (344aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Rhizobium sp. CF080 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_605_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6270..7214
DNA (945bp) protein (315aa)
Phosphonate ABC transporter, periplasmic phosphonate-binding protein Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VQE2_9CYAN
phosphonate ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_605_8
Leptosphaeria maculans, Leptosphaeria, Pleosporales, Pleosporomycetidae, Ascomycota, Fungi

Not on your lists

comp(7461..9602)
DNA (2142bp) protein (714aa)
Uncharacterized protein Tax=Leptosphaeria maculans (strain JN3 / isolate v23.1.3 / race Av1-4-5-6-7-8) RepID=E5A6G1_LEPMJ
Uncharacterized protein {ECO:0000313|EMBL:CBX99206.1}; species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Leptosphaeriaceae; Leptosphaeria; Leptosphaeria maculans complex.;" source="Leptosphaeria maculans (strain JN3 / isolate v23.1.3 / race; Av1-4-5-6-7-8) (Blackleg fungus) (Phoma lingam).;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_605_9
unknown

Not on your lists

comp(9878..9982)
DNA (105bp) protein (35aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_605_10
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(10049..10603)
DNA (555bp) protein (185aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI000365C38F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV60788.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
PLM3-1_170_b2_sep16_scaffold_605_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(11249..11503)
DNA (255bp) protein (85aa)
Uncharacterized protein Tax=Bdellovibrio exovorus JSS RepID=M4V5L3_9DELT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b2_sep16_scaffold_605_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11773..12879
DNA (1107bp) protein (369aa)
Amidohydrolase 2 Tax=Frankia sp. (strain EuI1c) RepID=E3J7T4_FRASU
amidohydrolase 2
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_605_13
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12898..14154)
DNA (1257bp) protein (419aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036EB9D1
transposase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_605_14
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14339..15421
DNA (1083bp) protein (361aa)
putative zinc-containing alcohol dehydrogenase (EC:1.1.1.-)
hypothetical protein Tax=Streptomyces sp. BoleA5 RepID=UPI0003762627
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_605_15
Cyanothece sp. PCC 7424, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

15770..17689
DNA (1920bp) protein (640aa)
cyclic nucleotide-binding protein (EC:3.5.1.2)
Glutaminase {ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|SAAS:SAAS00041476};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7424) (Synechococcus sp. (strain ATCC; 29155)).;"
Cyclic nucleotide-binding protein Tax=Cyanothece sp. (strain PCC 7424) RepID=B7KAW8_CYAP7
PLM3-1_170_b2_sep16_scaffold_605_16
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17848..18204
DNA (357bp) protein (119aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_605_17
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18465..19235)
DNA (771bp) protein (257aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Marinobacter algicola genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_605_18
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19328..19528)
DNA (201bp) protein (67aa)
Aldehyde ferredoxin oxidoreductase bin=GWC2_Methylomirabilis_70_16 species=Archaeoglobus sulfaticallidus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 18 items

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