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PLM3-1_170_b2_sep16_scaffold_613

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_613_1
RHI_Planctomycetes_42_15, Planctomycetes, Bacteria

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2..796
DNA (795bp) protein (265aa)
RNA-directed DNA polymerase Tax=planctomycete KSU-1 RepID=I3IK81_9PLAN
RNA-directed DNA polymerase
Tax=RIFCSPHIGHO2_12_Planctomycetes_42_15_curated
PLM3-1_170_b2_sep16_scaffold_613_2
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1800..2675
DNA (876bp) protein (292aa)
Uracil-DNA glycosylase superfamily protein Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZ06_9RHIZ
Uracil-DNA glycosylase superfamily protein {ECO:0000313|EMBL:EHK54035.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
uracil-DNA glycosylase
PLM3-1_170_b2_sep16_scaffold_613_3
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3329..4114)
DNA (786bp) protein (262aa)
3-ketoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier protein) reductase Tax=Planococcus donghaensis MPA1U2 RepID=E7RHQ8_9BACL
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_613_4
Methanosarcina lacustris, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4381..4905
DNA (525bp) protein (175aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB76086.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina lacustris Z-7289.;"
Peptidase C14, caspase catalytic subunit p20 bin=GWA2_Elusimicrobia_69_24 species=Microcystis aeruginosa genus=Microcystis taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
PLM3-1_170_b2_sep16_scaffold_613_5
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5029..5724)
DNA (696bp) protein (232aa)
Sugar fermentation stimulation protein homolog Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7ALN2_GEOSK
transcriptional regulator
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
PLM3-1_170_b2_sep16_scaffold_613_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5838..8054
DNA (2217bp) protein (739aa)
Putative aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein bin=GWD2_Deltaproteobacteria_55_8 species=uncultured marine microorganism HF4000_ANIW93N21 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_613_7
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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8178..8678
DNA (501bp) protein (167aa)
ats; N-acetyltransferase ats1 (EC:2.3.1.-)
GCN5-related N-acetyltransferase bin=GWF2_Lentisphaerae_50_93 species=Chroococcidiopsis thermalis genus=Chroococcidiopsis taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Tax=GWF2_Lentisphaerae_50_93_curated
PLM3-1_170_b2_sep16_scaffold_613_8
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8723..9388)
DNA (666bp) protein (222aa)
DegS sensor signal transduction histidine kinase bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
two-component system sensor protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_613_9
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9548..9757)
DNA (210bp) protein (70aa)
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_613_10
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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9975..10520
DNA (546bp) protein (182aa)
hypothetical protein Tax=Leptolyngbya boryana RepID=UPI00036D88E2
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_613_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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10531..10776
DNA (246bp) protein (82aa)
pdhC; dihydrolipoamide acetyltransferase (EC:2.3.1.12)
Dihydrolipoamide acetyltransferase Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11S33_CYTH3
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_613_12
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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10980..12764
DNA (1785bp) protein (595aa)
dolichyl-phosphate-mannose-protein mannosyltransferase proteins (EC:2.4.1.109)
Dolichyl-phosphate-mannose-protein mannosyltransferase Tax=delta proteobacterium NaphS2 RepID=D8F7C4_9DELT
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_613_13
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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12757..13653
DNA (897bp) protein (299aa)
Uncharacterized protein Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4KVW1_9DELT
family 2 glycosyl transferase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_613_14
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

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13851..15401
DNA (1551bp) protein (517aa)
Putative uncharacterized protein bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein
Tax=RBG_13_OP3X_46_9_curated
PLM3-1_170_b2_sep16_scaffold_613_15
RIFOXYC12_FULL_Lentisphaerae_60_16_curated, Lentisphaerae, Bacteria

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15509..16642
DNA (1134bp) protein (378aa)
Glycosyl transferase, group 1 bin=GWF2_Lentisphaerae_57_35 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
glycosyltransferase-like protein
Tax=RIFOXYC12_FULL_Lentisphaerae_60_16_curated
PLM3-1_170_b2_sep16_scaffold_613_16
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16668..17807)
DNA (1140bp) protein (380aa)
Glycosyltransferase Tax=Thiorhodovibrio sp. 970 RepID=H8Z0J3_9GAMM
Glycosyltransferase {ECO:0000313|EMBL:EIC21294.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;"
group 1 glycosyl transferase
PLM3-1_170_b2_sep16_scaffold_613_17
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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17980..18969
DNA (990bp) protein (330aa)
Putative ABC-2 type transporter superfamily Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T4C0_META2
ABC transporter
Putative ABC-2 type transporter superfamily {ECO:0000313|EMBL:CCE24931.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM; B-2133 / 20Z).;"
PLM3-1_170_b2_sep16_scaffold_613_18
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

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18985..20301
DNA (1317bp) protein (439aa)
Putative uncharacterized protein bin=GWC2_Nitrospirae_57_13 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
ABC transporter
Tax=RBG_16_Planctomycetes_43_13_curated
PLM3-1_170_b2_sep16_scaffold_613_19
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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20405..22210
DNA (1806bp) protein (602aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1YA61_9DELT
Putative uncharacterized protein {ECO:0000313|EMBL:CBX27455.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
family 2 glycosyl transferase
PLM3-1_170_b2_sep16_scaffold_613_20
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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22227..24311
DNA (2085bp) protein (695aa)
hypothetical protein Tax=Oceanimonas smirnovii RepID=UPI00035E35D9
Uncharacterized protein {ECO:0000313|EMBL:CDH46429.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
family 2 glycosyl transferase
PLM3-1_170_b2_sep16_scaffold_613_21
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(24319..25200)
DNA (882bp) protein (294aa)
hypothetical protein Tax=Lamprocystis purpurea RepID=UPI00035CC5F5
Uncharacterized protein {ECO:0000313|EMBL:GAO37041.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
putative glycosyltransferase
PLM3-1_170_b2_sep16_scaffold_613_22
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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25378..26178
DNA (801bp) protein (267aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AMP0_PELPD
prepilin peptidase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_613_23
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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26294..26737
DNA (444bp) protein (148aa)
Pilin assembly protein bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_613_24
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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26753..27157
DNA (405bp) protein (135aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_613_25
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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27157..27804
DNA (648bp) protein (216aa)
id=1748903 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_613_26
unknown

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27855..28511
DNA (657bp) protein (219aa)

This feature has no annotations

Displaying 26 items

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