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PLM3-1_170_b2_sep16_scaffold_701

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_701_1

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comp(1..600)
DNA (600bp) protein (200aa)
HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like) Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5W7_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KKM47135.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
HAD family hydrolase
PLM3-1_170_b2_sep16_scaffold_701_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(772..3630)
DNA (2859bp) protein (953aa)
Transposase IS66 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01TS6_SOLUE
transposase IS66
Transposase IS66 {ECO:0000313|EMBL:ABJ86944.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3-1_170_b2_sep16_scaffold_701_3
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(4152..4550)
DNA (399bp) protein (133aa)
hypothetical protein Tax=zeta proteobacterium SCGC AB-604-B04 RepID=UPI00035DBF24
HEPN domain-containing protein
HEPN domain protein {ECO:0000313|EMBL:ABQ91404.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
PLM3-1_170_b2_sep16_scaffold_701_4
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(4540..4890)
DNA (351bp) protein (117aa)
DNA polymerase, beta domain protein region Tax=Roseiflexus sp. (strain RS-1) RepID=A5UXQ2_ROSS1
DNA polymerase subunit beta
DNA polymerase, beta domain protein region {ECO:0000313|EMBL:ABQ91405.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
PLM3-1_170_b2_sep16_scaffold_701_5
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5242..5565)
DNA (324bp) protein (108aa)
Uncharacterized protein Tax=Bradyrhizobium sp. STM 3843 RepID=H0TFB2_9BRAD
Putative O-methyltransferase {ECO:0000313|EMBL:CDX43097.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
type 11 methyltransferase
PLM3-1_170_b2_sep16_scaffold_701_6
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5516..6646)
DNA (1131bp) protein (377aa)
Amidohydrolase 2 bin=GWB2_Chloroflexi_49_20 species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
amidohydrolase 2
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_701_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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6827..8776
DNA (1950bp) protein (650aa)
acs; acetate--CoA ligase; K01895 acetyl-CoA synthetase [EC:6.2.1.1] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
AMP-dependent synthetase and ligase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_701_8
RLO_PLX_64_10, Bacteria

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comp(9255..9848)
DNA (594bp) protein (198aa)
Putative uncharacterized protein Tax=Beggiatoa sp. PS RepID=A7BU73_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_170_b2_sep16_scaffold_701_9
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10070..10873)
DNA (804bp) protein (268aa)
BioH bin=GWA2_Deltaproteo_65_63 species=Kurthia sp. 538-KA26 genus=Kurthia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
MhpC; alpha/beta hydrolase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_701_10
unknown

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comp(11034..11681)
DNA (648bp) protein (216aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_701_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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11961..12395
DNA (435bp) protein (145aa)
Transcriptional regulator, BadM/Rrf2 family Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TVH5_9CYAN
BadM/Rrf2 family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_701_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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12493..14787
DNA (2295bp) protein (765aa)
Nitrite and sulphite reductase 4Fe-4S region bin=GWD2_Deltaproteobacteria_55_8 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrite and sulfite reductase 4Fe-4S region
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_701_13
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14801..15400
DNA (600bp) protein (200aa)
id=1883725 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_701_14
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15415..16155
DNA (741bp) protein (247aa)
phosphoadenosine phosphosulfate reductase (EC:1.8.4.8)
Putative PAPS reductase Tax=uncultured crenarchaeote RepID=Q702F7_9CREN
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_701_15
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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16214..17080
DNA (867bp) protein (289aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMZ1_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE68091.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_170_b2_sep16_scaffold_701_16
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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17213..17482
DNA (270bp) protein (90aa)
Siroheme synthase bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
siroheme synthase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Displaying 16 items

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