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PLM3-1_170_b2_sep16_scaffold_1031

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1031_1
CSP1_5_NC10, NC10, Bacteria

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2..214
DNA (213bp) protein (71aa)
putative type 2 secretion system protein bin=bin3_NC10 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
PLM3-1_170_b2_sep16_scaffold_1031_2
CSP1_5_NC10, NC10, Bacteria

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222..1157
DNA (936bp) protein (312aa)
Flp pilus assembly protein; K12511 tight adherence protein C bin=bin3_NC10 species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
flp pilus assembly protein
Tax=CSP1_5_NC10
PLM3-1_170_b2_sep16_scaffold_1031_3
CSP1_5_NC10, NC10, Bacteria

Not on your lists

1211..2422
DNA (1212bp) protein (404aa)
TadE family protein bin=bin3_NC10 species=Burkholderia pseudomallei genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3-1_170_b2_sep16_scaffold_1031_4
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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2510..3058
DNA (549bp) protein (183aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
pilD; type IV pilus prepilin peptidase PilD (EC:2.1.1.- 3.4.23.43)
type 4 prepilin-like proteins leader peptide processing enzyme bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
PLM3-1_170_b2_sep16_scaffold_1031_5
unknown

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3060..3383
DNA (324bp) protein (108aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1031_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3420..4415
DNA (996bp) protein (332aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Rhizopus delemar genus=Rhizopus taxon_order=Mucorales taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_1031_7
unknown

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4798..5043
DNA (246bp) protein (82aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1031_8
unknown

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comp(5047..5190)
DNA (144bp) protein (48aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1031_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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5447..6832
DNA (1386bp) protein (462aa)
Uncharacterized protein Tax=Brachypodium distachyon RepID=I1ICX2_BRADI
amino acid transporter
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1031_10
unknown

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7291..8712
DNA (1422bp) protein (474aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1031_11
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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9074..11062
DNA (1989bp) protein (663aa)
Uncharacterized protein Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YLD1_MOBAS
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_1031_12
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11094..13073
DNA (1980bp) protein (660aa)
hypothetical protein Tax=Methylobacterium sp. WSM2598 RepID=UPI0003691F9F
Uncharacterized protein {ECO:0000313|EMBL:ETX09020.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1031_13
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

13104..15047
DNA (1944bp) protein (648aa)
hypothetical protein Tax=Chelatococcus sp. GW1 RepID=UPI0002E34575
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b2_sep16_scaffold_1031_14
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15089..16078)
DNA (990bp) protein (330aa)
Putative uncharacterized protein bin=GWF2_Syntrophobacterales_56_9 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1031_15
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16206..17198)
DNA (993bp) protein (331aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Bradyrhizobium sp. CCGE-LA001 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1031_16
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

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comp(17425..17736)
DNA (312bp) protein (104aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_13_RIF03_48_7_curated
PLM3-1_170_b2_sep16_scaffold_1031_17
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17726..18001)
DNA (276bp) protein (92aa)
Putative uncharacterized protein Tax=Legionella drancourtii LLAP12 RepID=G9EP78_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL30913.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
hypothetical protein
Displaying 17 items

View Taxonomy