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PLM3-1_170_b2_sep16_scaffold_1301

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1301_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(3..209)
DNA (207bp) protein (69aa)
plasmid stabilization protein Tax=Desulfovibrio longus RepID=UPI0003B503CD
parE; plasmid stabilization system protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b2_sep16_scaffold_1301_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(209..484)
DNA (276bp) protein (92aa)
Prevent-host-death family protein Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GLB1_THISH
prevent-host-death family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3-1_170_b2_sep16_scaffold_1301_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(777..1037)
DNA (261bp) protein (87aa)
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_1301_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1440..3137)
DNA (1698bp) protein (566aa)
Fimbrial assembly family protein Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NGR0_DESAR
fimbrial assembly family protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_1301_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3315..4331)
DNA (1017bp) protein (339aa)
Type II secretion system protein K Tax=delta proteobacterium NaphS2 RepID=D8EYG4_9DELT
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_1301_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4328..5038)
DNA (711bp) protein (237aa)
Prepilin-type N-terminal cleavage/methylation domain protein Tax=delta proteobacterium NaphS2 RepID=D8EYG3_9DELT
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_1301_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5044..5445)
DNA (402bp) protein (134aa)
hypothetical protein Tax=Thioalkalivibrio sp. ALE11 RepID=UPI0003827DBA
General secretion pathway protein I, GspI
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_1301_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5451..5954)
DNA (504bp) protein (168aa)
General secretion pathway protein H Tax=Rhodanobacter denitrificans RepID=I4WMR5_9GAMM
general secretion pathway protein H
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_1301_9
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5896..6267)
DNA (372bp) protein (124aa)
General secretion pathway protein G bin=GWD2_Deltaproteobacteria_55_8 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
general secretion pathway protein G
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_1301_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6353..7576)
DNA (1224bp) protein (408aa)
General secretion pathway protein F bin=GWD2_Deltaproteobacteria_55_8 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
type II secretion system protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1301_11
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7727..9424)
DNA (1698bp) protein (566aa)
Type II secretion system protein E (GspE) bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
General secretion pathway protein E (Type II traffic warden ATPase)
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_1301_12
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9448..9822)
DNA (375bp) protein (125aa)
Cupin 2 conserved barrel domain protein bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
cupin domain-containing protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_1301_13
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10084..11238
DNA (1155bp) protein (385aa)
Amidohydrolase Tax=Sphingobium quisquiliarum P25 RepID=T0HRK1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ETW97604.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1301_14
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11373..12395
DNA (1023bp) protein (341aa)
1-hydroxy-2-naphthoate dioxygenase (EC:1.13.11.38)
1-hydroxy-2-naphthoate dioxygenase Tax=Mycobacterium sp. (strain Spyr1) RepID=E6TIQ7_MYCSR
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1301_15
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12527..13717
DNA (1191bp) protein (397aa)
fbpC; Fe3+ ABC transporter ATPase FbpC/AfuC (EC:3.6.3.30)
ABC transporter ATP-binding protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Caldiarchaeum subterraneum genus=Candidatus Caldiarchaeum taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1301_16
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14168..14872
DNA (705bp) protein (235aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1301_17
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14962..16767
DNA (1806bp) protein (602aa)
ABC-type Fe3+ transport system permease component bin=GWD2_Deltaproteobacteria_55_8 species=Agrobacterium tumefaciens genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ABC-type Fe3+ transport system permease component
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_1301_18
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16931..18556
DNA (1626bp) protein (542aa)
ilvB; acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6)
Thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase Tax=Metallosphaera yellowstonensis MK1 RepID=H2C1V5_9CREN
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1301_19
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19115..19309
DNA (195bp) protein (65aa)
Acetolactate synthase, large subunit (EC:2.2.1.6)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037215E5
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
PLM3-1_170_b2_sep16_scaffold_1301_20
R_NC10_66_22, NC10, Bacteria

Not on your lists

19663..20034
DNA (372bp) protein (124aa)
hypothetical protein Tax=Lamprocystis purpurea RepID=UPI00037E838F
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_1301_21
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20031..20225
DNA (195bp) protein (65aa)
hypothetical protein Tax=Brevibacterium sp. JC43 RepID=UPI00030D9E5F
thiamine pyrophosphate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
PLM3-1_170_b2_sep16_scaffold_1301_22
unknown

Not on your lists

20334..20678
DNA (345bp) protein (115aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1301_23
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20807..21283
DNA (477bp) protein (159aa)
hypothetical protein Tax=Microbulbifer variabilis RepID=UPI0003723620
cupin 2 domain-containing protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3-1_170_b2_sep16_scaffold_1301_24
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21335..22186)
DNA (852bp) protein (284aa)
Pirin domain protein bin=GWC2_Deltaproteobacteria_66_88 species=Methanobacterium sp. genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
pirin
Tax=GWA2_Deltaproteobacteria_65_63_curated
PLM3-1_170_b2_sep16_scaffold_1301_25
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22202..23092)
DNA (891bp) protein (297aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
NMT1/THI5 like domain-containing protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_1301_26
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23481..23789
DNA (309bp) protein (103aa)
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM3-1_170_b2_sep16_scaffold_1301_27
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23944..26199
DNA (2256bp) protein (752aa)
Uncharacterized protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RR88_ACCPU
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM3-1_170_b2_sep16_scaffold_1301_28
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26196..27590
DNA (1395bp) protein (465aa)
Uncharacterized protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RR87_ACCPU
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM3-1_170_b2_sep16_scaffold_1301_29
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27806..28618
DNA (813bp) protein (271aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1301_30
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29138..30040)
DNA (903bp) protein (301aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Azospira oryzae genus=Azospira taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein-like protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying items 1-30 of 44 in total

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