ggKbase home page

PLM3-1_170_b2_sep16_scaffold_1381

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1381_1
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(593..796)
DNA (204bp) protein (68aa)
hypothetical protein bin=bin1_lowGC species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
transposase
Tax=CSP1_2_Dadabacteria
PLM3-1_170_b2_sep16_scaffold_1381_2
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(796..1560)
DNA (765bp) protein (255aa)
Putative uncharacterized protein Tax=Beggiatoa sp. PS RepID=A7BUU8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EDN69684.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
fibronectin I domain-containing protein
PLM3-1_170_b2_sep16_scaffold_1381_3
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1974..2681
DNA (708bp) protein (236aa)
Uncharacterized protein bin=GWF2_OP9-related_38_17 species=Simiduia agarivorans genus=Simiduia taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
PLM3-1_170_b2_sep16_scaffold_1381_4
unknown

Not on your lists

3270..3437
DNA (168bp) protein (56aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1381_5
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4004..5158)
DNA (1155bp) protein (385aa)
ATPase (AAA+ superfamily)-like protein bin=GWA2_Deltaproteo_65_63 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
ATPase AAA
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3-1_170_b2_sep16_scaffold_1381_6
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5408..6769)
DNA (1362bp) protein (454aa)
Putative uncharacterized protein Tax=uncultured marine microorganism HF4000_ANIW93N21 RepID=B3T353_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:ETW97179.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
capsule synthesis protein CapA
PLM3-1_170_b2_sep16_scaffold_1381_7
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7166..7522
DNA (357bp) protein (119aa)
NADH-quinone oxidoreductase subunit A Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9LZL7_GEODF
NADH-ubiquinone/plastoquinone oxidoreductase chain 3
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_1381_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7529..8092
DNA (564bp) protein (188aa)
nuoC1; NADH dehydrogenase (ubiquinone) (EC:1.6.5.3)
hypothetical protein Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI00036F8F63
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_1381_9
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8495..9685
DNA (1191bp) protein (397aa)
NADH dehydrogenase subunit D (EC:1.6.99.5)
NADH dehydrogenase I subunit D Tax=uncultured prokaryote RepID=H5SP86_9ZZZZ
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_1381_10
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9776..10249
DNA (474bp) protein (158aa)
nuoE; NADH-quinone oxidoreductase subunit E (EC:1.6.99.5)
NADH-quinone oxidoreductase, subunit E bin=GWD2_Deltaproteobacteria_55_8 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_1381_11
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10367..11635
DNA (1269bp) protein (423aa)
NADH-quinone oxidoreductase subunit F (EC:1.6.99.5)
NADH dehydrogenase subunit F bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_1381_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11742..12866
DNA (1125bp) protein (375aa)
NADH dehydrogenase I subunit G bin=GWD2_Deltaproteobacteria_55_8 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nuoG; NADH dehydrogenase I subunit G
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 12 items

View Taxonomy