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PLM3-1_170_b2_sep16_scaffold_1551

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1551_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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53..853
DNA (801bp) protein (267aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component bin=GWB2_Nitrospirae_rel_47_37 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
putative nitrate transport system permease
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3-1_170_b2_sep16_scaffold_1551_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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857..1711
DNA (855bp) protein (285aa)
Nitrate transport ATP-binding subunits C and D bin=GWB2_Nitrospirae_rel_47_37 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
nitrate ABC transporter ATPase
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3-1_170_b2_sep16_scaffold_1551_3
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

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1764..2222
DNA (459bp) protein (153aa)
Cyanate hydratase bin=GWB2_Nitrospirae_rel_47_37 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
cyanate hydratase
Tax=GWB2_Nitrospirae_47_37_curated
PLM3-1_170_b2_sep16_scaffold_1551_4
Azotobacter vinelandii, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2229..3734)
DNA (1506bp) protein (502aa)
Fumarate reductase/succinate dehyfrogenase, flavoprotein subunit Tax=Azotobacter vinelandii RepID=C1DFD0_AZOVD
fumarate reductase/succinate dehyfrogenase, flavoprotein subunit
Fumarate reductase/succinate dehyfrogenase, flavoprotein subunit {ECO:0000313|EMBL:AGK20420.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter vinelandii CA6.;"
PLM3-1_170_b2_sep16_scaffold_1551_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3862..4971)
DNA (1110bp) protein (370aa)
hypothetical protein SPAM21_08638 bin=GWD2_Deltaproteobacteria_55_8 species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1551_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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5294..5611
DNA (318bp) protein (106aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Cupriavidus pinatubonensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1551_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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5592..7436
DNA (1845bp) protein (615aa)
pyruvate ferredoxin oxidoreductase, alpha chain (EC:1.2.7.1)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000378B61D
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_1551_8
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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7532..8470
DNA (939bp) protein (313aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003653468
2-oxoacid:ferredoxin oxidoreductase subunit beta
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_1551_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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8925..9782
DNA (858bp) protein (286aa)
Amidohydrolase 2 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
TIM-barrel fold metal-dependent hydrolase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1551_10
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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9840..10532
DNA (693bp) protein (231aa)
transposase IS200 Tax=Methylohalobius crimeensis RepID=UPI0003B5C244
transposase IS200-family protein
Tax=RBG_16_Deltaproteobacteria_58_17_curated
PLM3-1_170_b2_sep16_scaffold_1551_11
unknown

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10623..10721
DNA (99bp) protein (33aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1551_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11204..11476
DNA (273bp) protein (91aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1551_13
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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11588..12094
DNA (507bp) protein (169aa)
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein bin=GWD2_Deltaproteobacteria_55_8 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
oxidoreductase molybdopterin binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 13 items

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