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PLM3-1_170_b2_sep16_scaffold_9286

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_9286_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..1725)
DNA (1725bp) protein (575aa)
Nitrate reductase bin=GWD2_Deltaproteobacteria_55_8 species=Synechocystis sp. PCC 7509 genus=Synechocystis taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
molybdopterin oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_9286_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1769..2734)
DNA (966bp) protein (322aa)
Nitrate ABC transporter, ATPase subunits C and D Tax=Pedosphaera parvula Ellin514 RepID=B9XJ70_9BACT
Nitrate ABC transporter, ATPase subunits C and D {ECO:0000313|EMBL:EEF60108.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
nrtD; nitrate/nitrite ABC transporter ATP-binding protein
PLM3-1_170_b2_sep16_scaffold_9286_3
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(2753..3595)
DNA (843bp) protein (281aa)
Nitrate transport ATP-binding subunits C and D Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FVN3_ECHVK
nitrate transport ATP-binding subunits C and D
Nitrate transport ATP-binding subunits C and D {ECO:0000313|EMBL:AGA77367.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
PLM3-1_170_b2_sep16_scaffold_9286_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(3603..4376)
DNA (774bp) protein (258aa)
Nitrate/nitrite ABC transporter membrane protein bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
nitrate ABC transporter, inner membrane subunit
Tax=GWA2_Rokubacteria_73_35_curated
PLM3-1_170_b2_sep16_scaffold_9286_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(4391..5605)
DNA (1215bp) protein (405aa)
Nitrate/nitrite ABC transporter substrate-binding protein bin=GWA2_Methylomirabilis_73_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
nitrate/nitrite ABC transporter substrate-binding protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3-1_170_b2_sep16_scaffold_9286_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5611..7464)
DNA (1854bp) protein (618aa)
nirA; ferredoxin-nitrite reductase (EC:1.7.7.1)
ferredoxin-nitrite reductase Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B45614
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_9286_7
unknown

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comp(7693..7959)
DNA (267bp) protein (89aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_9286_8
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8199..8786)
DNA (588bp) protein (196aa)
Response regulator receiver bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Response regulator receiver
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_9286_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8783..8986)
DNA (204bp) protein (68aa)
Glutamine amidotransferase class-I bin=GWD2_Deltaproteobacteria_55_8 species=Desulfurobacterium thermolithotrophum genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 9 items

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