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PLM3-1_170_b2_sep16_scaffold_6912

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_6912_1
unknown

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comp(3..128)
DNA (126bp) protein (42aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_6912_2
unknown

Not on your lists

246..413
DNA (168bp) protein (56aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_6912_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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495..1271
DNA (777bp) protein (259aa)
ispU; Undecaprenyl pyrophosphate synthetase 2 (UPP synthetase 2) (Di-trans,poly-cis-decaprenylcistransferase 2) (Undecaprenyl diphosphate synthase 2) (UDS 2) (EC:2.5.1.31)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Isoprenyl transferase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MH95_9BACT
PLM3-1_170_b2_sep16_scaffold_6912_4
unknown

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1405..1788
DNA (384bp) protein (128aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_6912_5
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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1845..2186
DNA (342bp) protein (114aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MH94_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69126.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_170_b2_sep16_scaffold_6912_6
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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2299..2613
DNA (315bp) protein (105aa)
hypothetical protein Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00037D28D8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69125.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_170_b2_sep16_scaffold_6912_7
unknown

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3975..4145
DNA (171bp) protein (57aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_6912_8
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4260..4931
DNA (672bp) protein (224aa)
TadE family protein bin=GWC2_Deltaproteobacteria_66_88 species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
TadE family protein
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
PLM3-1_170_b2_sep16_scaffold_6912_9
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4931..5728
DNA (798bp) protein (266aa)
Flp pilus assembly protein CpaB bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
SAF domain-containing protein
Tax=GWA2_Deltaproteobacteria_65_63_curated
PLM3-1_170_b2_sep16_scaffold_6912_10
CSP1_5_NC10, NC10, Bacteria

Not on your lists

6074..7429
DNA (1356bp) protein (452aa)
putative pilus assembly protein CpaC; K02280 pilus assembly protein CpaC bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
putative pilus assembly protein CpaC
Tax=CSP1_5_NC10
PLM3-1_170_b2_sep16_scaffold_6912_11
unknown

Not on your lists

7488..8072
DNA (585bp) protein (195aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_6912_12
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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8102..8344
DNA (243bp) protein (81aa)
Uncharacterized protein Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AN13_DESPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAG36261.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" source="Desulfotalea psychrophila (strain LSv54 / DSM 12343).;"
PLM3-1_170_b2_sep16_scaffold_6912_13
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8452..9210
DNA (759bp) protein (253aa)
Uncharacterized protein Tax=Desulfovibrio sp. X2 RepID=S7VCH0_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPR44399.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. X2.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_6912_14

Not on your lists

9228..10454
DNA (1227bp) protein (409aa)
Response regulator receiver protein Tax=Geobacter sp. M18 RepID=C6MUN1_9DELT bin=ACD20 species=Geobacter sp. M18 genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
Response regulator receiver protein {ECO:0000313|EMBL:EKE02829.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
response regulator receiver protein
PLM3-1_170_b2_sep16_scaffold_6912_15
unknown

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10456..10785
DNA (330bp) protein (110aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_6912_16
CSP1_5_NC10, NC10, Bacteria

Not on your lists

10807..12186
DNA (1380bp) protein (460aa)
type II secretion system protein E; K02283 pilus assembly protein CpaF bin=bin3_NC10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
type II secretion system protein E
Tax=CSP1_5_NC10
PLM3-1_170_b2_sep16_scaffold_6912_17
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12190..13146
DNA (957bp) protein (319aa)
Type II secretion system F domain protein bin=GWB2_Deltaproteobacteria_65_81 species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
tight adherence TadB-related transmembrane protein
Tax=GWA2_Deltaproteobacteria_65_63_curated
PLM3-1_170_b2_sep16_scaffold_6912_18
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

Not on your lists

13163..13981
DNA (819bp) protein (273aa)
hypothetical protein Tax=Cupriavidus sp. WS RepID=UPI0003805E3A
flp pilus assembly protein
Tax=RBG_13_Nitrospirae_41_22_curated
Displaying 18 items

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