ggKbase home page

PLM3-1_170_b2_sep16_scaffold_3243

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_3243_1
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(2..811)
DNA (810bp) protein (270aa)
Glycosyl transferase family 39 Tax=Patulibacter medicamentivorans RepID=H0E3W1_9ACTN
Glycosyl transferase family 39 {ECO:0000313|EMBL:EHN11642.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
glycosyl transferase family protein
PLM3-1_170_b2_sep16_scaffold_3243_2
GWC2_OD1_37_14, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(876..2258)
DNA (1383bp) protein (461aa)
Sulfatase Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CKM3_DESK7
Sulfatase {ECO:0000313|EMBL:KKQ26853.1}; Flags: Fragment;; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWC2_37_14.;"
sulfatase
PLM3-1_170_b2_sep16_scaffold_3243_3
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

comp(2488..3285)
DNA (798bp) protein (266aa)
hypothetical protein bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
PLM3-1_170_b2_sep16_scaffold_3243_4
GWA2_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

comp(3342..3533)
DNA (192bp) protein (64aa)
hypothetical protein bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Tax=GWA2_RIF03_38_11_curated
PLM3-1_170_b2_sep16_scaffold_3243_5
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

comp(3610..5646)
DNA (2037bp) protein (679aa)
hypothetical protein Tax=unclassified Aminicenantes RepID=UPI000367F662
type I phosphodiesterase/nucleotide pyrophosphatase
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
PLM3-1_170_b2_sep16_scaffold_3243_6
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

comp(5643..6698)
DNA (1056bp) protein (352aa)
nucleotide pyrophosphatase bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
type I phosphodiesterase/nucleotide pyrophosphatase
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
PLM3-1_170_b2_sep16_scaffold_3243_7

Not on your lists

comp(6695..7438)
DNA (744bp) protein (248aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL12006.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
nucleotide pyrophosphatase bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
type I phosphodiesterase/nucleotide pyrophosphatase
PLM3-1_170_b2_sep16_scaffold_3243_8
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(7692..9095)
DNA (1404bp) protein (468aa)
Strongly similar to cytochrome p450 hydroxylase MmcK Tax=Nitrolancetus hollandicus Lb RepID=I4EM09_9CHLR
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3-1_170_b2_sep16_scaffold_3243_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9145..10398)
DNA (1254bp) protein (418aa)
Glycosyl transferase family 2 bin=GWB2_Elusimicrobium_63_22 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
putative glycosyltransferase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_3243_10
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(10485..11834)
DNA (1350bp) protein (450aa)
hypothetical protein Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI00036A0001
sulfatase
Tax=RBG_16_Planctomycetes_43_13_curated
PLM3-1_170_b2_sep16_scaffold_3243_11
unknown

Not on your lists

comp(11863..12084)
DNA (222bp) protein (74aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_3243_12
unknown

Not on your lists

comp(12081..12263)
DNA (183bp) protein (61aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_3243_13
unknown

Not on your lists

12334..12609
DNA (276bp) protein (92aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_3243_14
Anabaena sp. 90, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(12544..13263)
DNA (720bp) protein (240aa)
sulfonate ABC transporter permease Tax=Mastigocladopsis repens RepID=UPI0002E217C6
bactoprenol-linked glucose translocase
Putative bactoprenol-linked glucose translocase {ECO:0000313|EMBL:AFW94173.1}; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena sp. 90.;"
PLM3-1_170_b2_sep16_scaffold_3243_15
unknown

Not on your lists

13594..14112
DNA (519bp) protein (173aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_3243_16
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13988..15796)
DNA (1809bp) protein (603aa)
Putative uncharacterized protein Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VMY4_RHOPX
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADU45852.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
PLM3-1_170_b2_sep16_scaffold_3243_17
unknown

Not on your lists

comp(15781..16014)
DNA (234bp) protein (78aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_3243_18
RLO_PLX_64_10, Bacteria

Not on your lists

comp(16045..16449)
DNA (405bp) protein (135aa)
hypothetical protein Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00035D6406
transposase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_170_b2_sep16_scaffold_3243_19
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(16550..17644)
DNA (1095bp) protein (365aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Lyngbya sp. PCC 8106 genus=Lyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3-1_170_b2_sep16_scaffold_3243_20
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(17651..17830)
DNA (180bp) protein (60aa)
Uncharacterized protein bin=GWA2_Elusimicrobia_69_24 species=Dyadobacter fermentans genus=Dyadobacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=GWA2_Elusimicrobia_69_24_curated
PLM3-1_170_b2_sep16_scaffold_3243_21
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(17835..18275)
DNA (441bp) protein (147aa)
Putative carbamoyl transferase; K00612 carbamoyltransferase [EC:2.1.3.-] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=bin1_lowGC organism_group=Unknown_CP
putative carbamoyl transferase, NodU family
Tax=CSP1_2_Dadabacteria
PLM3-1_170_b2_sep16_scaffold_3243_22
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(18292..19635)
DNA (1344bp) protein (448aa)
Putative carbamoyl transferase; K00612 carbamoyltransferase [EC:2.1.3.-] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=bin1_lowGC organism_group=Unknown_CP
carbamoyltransferase
Tax=CSP1_2_Dadabacteria
PLM3-1_170_b2_sep16_scaffold_3243_23
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(19647..19943)
DNA (297bp) protein (99aa)
hypothetical protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3-1_170_b2_sep16_scaffold_3243_24
unknown

Not on your lists

20125..20370
DNA (246bp) protein (82aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_3243_25
unknown

Not on your lists

comp(20444..20722)
DNA (279bp) protein (93aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_3243_26
unknown

Not on your lists

comp(20783..21283)
DNA (501bp) protein (167aa)

This feature has no annotations

Displaying 26 items

View Taxonomy