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PLM3-1_170_b2_sep16_scaffold_2028

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_2028_1
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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1..1149
DNA (1149bp) protein (383aa)
hom; homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579, ECO:0000313|EMBL:CBE67662.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Homoserine dehydrogenase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKL5_9BACT
PLM3-1_170_b2_sep16_scaffold_2028_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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1544..2209
DNA (666bp) protein (222aa)
thrC; threonine synthase (EC:4.2.3.1)
Threonine synthase {ECO:0000256|PIRNR:PIRNR038945, ECO:0000313|EMBL:CBE67663.1}; EC=4.2.3.1 {ECO:0000256|PIRNR:PIRNR038945, ECO:0000313|EMBL:CBE67663.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Threonine synthase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKL6_9BACT
PLM3-1_170_b2_sep16_scaffold_2028_trna_1
unknown

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2270..2341
DNA (72bp)
transferRNA Gly
PLM3-1_170_b2_sep16_scaffold_2028_trna_2
unknown

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2476..2548
DNA (73bp)
transferRNA Cys
PLM3-1_170_b2_sep16_scaffold_2028_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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2851..3123
DNA (273bp) protein (91aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MH24_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69055.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_170_b2_sep16_scaffold_2028_trna_3
unknown

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3215..3299
DNA (85bp)
transferRNA Leu
PLM3-1_170_b2_sep16_scaffold_2028_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3518..3943
DNA (426bp) protein (142aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3-1_170_b2_sep16_scaffold_2028_5
unknown

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3960..4109
DNA (150bp) protein (50aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2028_6
unknown

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4749..5486
DNA (738bp) protein (246aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2028_7
unknown

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comp(5734..5994)
DNA (261bp) protein (87aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2028_8
CG_Elusi_05, Elusimicrobia, Bacteria

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comp(5994..6302)
DNA (309bp) protein (103aa)
Uncharacterized protein bin=GWC2_Planctomycete_KSU_39_26 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
Tax=CG_Elusi_05
PLM3-1_170_b2_sep16_scaffold_2028_trna_4
unknown

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6734..6805
DNA (72bp)
transferRNA Val
PLM3-1_170_b2_sep16_scaffold_2028_9
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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6910..8952
DNA (2043bp) protein (681aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
thrS; threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS) (EC:6.1.1.3)
Threonine--tRNA ligase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MGN4_9BACT
PLM3-1_170_b2_sep16_scaffold_2028_10
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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9080..9454
DNA (375bp) protein (125aa)
translation initiation factor IF-3 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI000375F4E5
infC; translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_170_b2_sep16_scaffold_2028_11
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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9470..9667
DNA (198bp) protein (66aa)
50S ribosomal protein L35 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MGN2_9BACT
rpmI; 50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_170_b2_sep16_scaffold_2028_12
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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9791..10150
DNA (360bp) protein (120aa)
50S ribosomal protein L20 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MGN1_9BACT
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_170_b2_sep16_scaffold_2028_13
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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10216..11268
DNA (1053bp) protein (351aa)
pheS; phenylalanyl-tRNA synthetase alpha chain (Phenylalanine--tRNA ligase alpha chain) (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Phenylalanine--tRNA ligase alpha subunit Tax=Candidatus Methylomirabilis oxyfera RepID=D5MGN0_9BACT
PLM3-1_170_b2_sep16_scaffold_2028_14
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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12068..13822
DNA (1755bp) protein (585aa)
pheT; phenylalanyl-tRNA synthetase beta chain (Phenylalanine--tRNA ligase beta chain) (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
hypothetical protein Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00037B7593
PLM3-1_170_b2_sep16_scaffold_2028_15
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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13874..14209
DNA (336bp) protein (112aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MGM5_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE68906.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_170_b2_sep16_scaffold_2028_16
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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14216..14434
DNA (219bp) protein (73aa)
hypothetical protein, partial Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI000362FEC3
hypothetical protein
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Displaying 20 items

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