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PLM3-1_170_b2_sep16_scaffold_2529

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_2529_1

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comp(3..329)
DNA (327bp) protein (109aa)
Marine sediment metagenome DNA, contig: S12H4_S12594 {ECO:0000313|EMBL:GAJ11451.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3-1_170_b2_sep16_scaffold_2529_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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580..1542
DNA (963bp) protein (321aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Quinolinate synthase A Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK49_9BACT
nadA; quinolinate synthetase A
PLM3-1_170_b2_sep16_scaffold_2529_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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1568..2431
DNA (864bp) protein (288aa)
nadC; quinolinate phosphoribosyltransferase (nicotinate-nucleotide pyrophosphorylase) (EC:2.4.2.19)
Quinolinate phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase) {ECO:0000313|EMBL:CBE69672.1}; EC=2.4.2.19 {ECO:0000313|EMBL:CBE69672.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Quinolinate phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK50_9BACT
PLM3-1_170_b2_sep16_scaffold_2529_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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2442..3209
DNA (768bp) protein (256aa)
nadB; L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049, ECO:0000313|EMBL:CBE69673.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
L-aspartate oxidase (Quinolinate synthetase B) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK51_9BACT
PLM3-1_170_b2_sep16_scaffold_2529_5
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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3226..3951
DNA (726bp) protein (242aa)
nadB; L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049, ECO:0000313|EMBL:CBE69673.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
L-aspartate oxidase (Quinolinate synthetase B) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK51_9BACT
PLM3-1_170_b2_sep16_scaffold_2529_6
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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4262..5293
DNA (1032bp) protein (344aa)
Alcohol dehydrogenase, zinc-binding domain protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK52_9BACT
alcohol dehydrogenase
Alcohol dehydrogenase, zinc-binding domain protein {ECO:0000313|EMBL:CBE69674.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_170_b2_sep16_scaffold_2529_7
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5547..6023
DNA (477bp) protein (159aa)
Uncharacterized protein Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J6V8_ANAD2
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_61_14_curated
PLM3-1_170_b2_sep16_scaffold_2529_8
GWC1_OD1_48_8_partial, Jorgensenbacteria, Parcubacteria, Bacteria

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comp(6062..6451)
DNA (390bp) protein (130aa)
Lactoylglutathione lyase Tax=Virgibacillus sp. CM-4 RepID=T0J100_9BACI
Uncharacterized protein {ECO:0000313|EMBL:KKU99026.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWC1_48_8.;"
glyoxalase/bleomycin resistance protein/dioxygenase
PLM3-1_170_b2_sep16_scaffold_2529_9
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6448..7446)
DNA (999bp) protein (333aa)
Nucleoside-diphosphate-sugar epimerase Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4BZZ9_DESTA
nucleoside-diphosphate-sugar epimerase
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:AFM22890.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
PLM3-1_170_b2_sep16_scaffold_2529_10
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7418..8341)
DNA (924bp) protein (308aa)
Uncharacterized protein Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C000_DESTA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM22891.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
PLM3-1_170_b2_sep16_scaffold_2529_11
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8338..9537)
DNA (1200bp) protein (400aa)
Uncharacterized protein Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C001_DESTA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM22892.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
PLM3-1_170_b2_sep16_scaffold_2529_12
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9534..10232)
DNA (699bp) protein (233aa)
Glycosyl transferase Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C002_DESTA
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:AFM22893.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
PLM3-1_170_b2_sep16_scaffold_2529_13
GWC2_Elusimicrobia_56_31_curated, Elusimicrobia, Bacteria

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comp(10229..11164)
DNA (936bp) protein (312aa)
transketolase, alpha subunit (EC:2.2.1.1)
Transketolase, alpha subunit bin=GWA2_Elusimicrobia_56_46 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
Tax=GWC2_Elusimicrobia_56_31_curated
PLM3-1_170_b2_sep16_scaffold_2529_14
GWC2_Elusimicrobia_56_31_curated, Elusimicrobia, Bacteria

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comp(11161..11973)
DNA (813bp) protein (271aa)
Transketolase bin=GWA2_Elusimicrobia_56_46 species=Saccharomonospora paurometabolica genus=Saccharomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
transketolase, beta subunit
Tax=GWC2_Elusimicrobia_56_31_curated
PLM3-1_170_b2_sep16_scaffold_2529_15
unknown

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comp(11930..12589)
DNA (660bp) protein (220aa)

This feature has no annotations

Displaying 15 items

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