ggKbase home page

PLM3-1_170_b2_sep16_scaffold_2774

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_2774_1
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

1..498
DNA (498bp) protein (166aa)
Penicillin-binding protein 2 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN65_9BACT
mrdA; penicillin-binding protein 2
Penicillin-binding protein 2 {ECO:0000313|EMBL:CBE70207.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_170_b2_sep16_scaffold_2774_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

512..1612
DNA (1101bp) protein (367aa)
Rod shape-determining protein rodA Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN66_9BACT
mrdB; Rod shape-determining protein rodA
Rod shape-determining protein rodA {ECO:0000313|EMBL:CBE70208.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_170_b2_sep16_scaffold_2774_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

1747..4566
DNA (2820bp) protein (940aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
ileS; isoleucine tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN67_9BACT
PLM3-1_170_b2_sep16_scaffold_2774_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

4689..5177
DNA (489bp) protein (163aa)
lspA; Lipoprotein signal peptidase (Prolipoprotein signal peptidase) (SPase II) (Signal peptidase II) (EC:3.4.23.36)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Lipoprotein signal peptidase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN68_9BACT
PLM3-1_170_b2_sep16_scaffold_2774_5
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

5174..6172
DNA (999bp) protein (333aa)
rluD; pseudouridine synthase (pseudouridines 1911, 1915, 1917 in 23S RNA) (EC:4.2.1.70)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Pseudouridine synthase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN69_9BACT
PLM3-1_170_b2_sep16_scaffold_2774_6
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6458..7375
DNA (918bp) protein (306aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_2774_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7595..8017)
DNA (423bp) protein (141aa)
Probable ribonuclease VapC bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
PilT-like protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3-1_170_b2_sep16_scaffold_2774_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8014..8214)
DNA (201bp) protein (67aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_2774_9
R_NC10_66_22, NC10, Bacteria

Not on your lists

8786..9043
DNA (258bp) protein (86aa)
glnS; glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase Tax=Aeromonas salmonicida subsp. pectinolytica 34mel RepID=T0PQM6_AERSA
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying 9 items

View Taxonomy