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PLM3-1_170_b2_sep16_scaffold_962

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_962_1
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(3..965)
DNA (963bp) protein (321aa)
nuoD; NADH-quinone oxidoreductase subunit D (NADH dehydrogenase I, chain D) (NDH-1, chain D) (EC:1.6.99.5 1.6.5.3)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; EC=1.6.99.5 {ECO:0000313|EMBL:CBE69771.1};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
NADH-quinone oxidoreductase subunit D Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKE9_9BACT
PLM3-1_170_b2_sep16_scaffold_962_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(958..1470)
DNA (513bp) protein (171aa)
NADH-quinone oxidoreductase (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; EC=1.6.99.5 {ECO:0000313|EMBL:CBE69772.1};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
NADH-quinone oxidoreductase subunit C Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKF0_9BACT
PLM3-1_170_b2_sep16_scaffold_962_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(1458..1817)
DNA (360bp) protein (120aa)
nuoA; NADH-quinone oxidoreductase subunit A (NADH dehydrogenase I, chain A) (NDH-1, chain A) (EC:1.6.99.5 1.6.5.3)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; EC=1.6.99.5 {ECO:0000313|EMBL:CBE69773.1};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
NADH-quinone oxidoreductase subunit A Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKF1_9BACT
PLM3-1_170_b2_sep16_scaffold_962_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(1868..2230)
DNA (363bp) protein (121aa)
ATP synthase subunit C, membrane-bound, F0 sector; DCCD-binding (EC:3.6.3.14)
ATP synthase subunit C, membrane-bound, F0 sector DCCD-binding (Modular protein) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKF2_9BACT
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_170_b2_sep16_scaffold_962_5
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(2261..2980)
DNA (720bp) protein (240aa)
ATP synthase subunit A (EC:3.6.3.14)
ATP synthase subunit a Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKF3_9BACT
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_170_b2_sep16_scaffold_962_6
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(3029..3244)
DNA (216bp) protein (72aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKF4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69776.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_170_b2_sep16_scaffold_962_7
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(3427..4878)
DNA (1452bp) protein (484aa)
nuoN; NADH-quinone oxidoreductase subunit N (NADH dehydrogenase I, chain N) (NDH-1, chain N) (EC:1.6.99.5 1.6.5.3)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; EC=1.6.99.5 {ECO:0000313|EMBL:CBE69777.1};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
NADH-quinone oxidoreductase subunit N Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKF5_9BACT
PLM3-1_170_b2_sep16_scaffold_962_8
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(4875..6515)
DNA (1641bp) protein (547aa)
nuoM; NADH-quinone oxidoreductase subunit M (NADH dehydrogenase I, chain M) (NDH-1, chain M) (EC:1.6.5.3 1.6.99.5)
NADH-quinone oxidoreductase chain M (NADH dehydrogenase I, chain M) (NDH-1, chain M) {ECO:0000313|EMBL:CBE69778.1}; EC=1.6.5.3 {ECO:0000313|EMBL:CBE69778.1};; EC=1.6.99.5 {ECO:0000313|EMBL:CBE69778.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
NADH-quinone oxidoreductase chain M (NADH dehydrogenase I, chain M) (NDH-1, chain M) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKF6_9BACT
PLM3-1_170_b2_sep16_scaffold_962_9
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(6623..8590)
DNA (1968bp) protein (656aa)
NADH-quinone oxidoreductase chain L (NADH dehydrogenase I, chain L) (NDH-1, chain L) {ECO:0000313|EMBL:CBE69779.1}; EC=1.6.5.3 {ECO:0000313|EMBL:CBE69779.1};; EC=1.6.99.5 {ECO:0000313|EMBL:CBE69779.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
nuoL; NADH-quinone oxidoreductase subunit L (NADH dehydrogenase I, chain L) (NDH-1, chain L) (EC:1.6.99.5 1.6.5.3)
NADH-quinone oxidoreductase chain L (NADH dehydrogenase I, chain L) (NDH-1, chain L) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKF7_9BACT
PLM3-1_170_b2_sep16_scaffold_962_10
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(8753..9061)
DNA (309bp) protein (103aa)
nuoK; NADH-quinone oxidoreductase subunit K (NADH dehydrogenase I, chain K) (NDH-1, chain K) (EC:1.6.5.3 1.6.99.5)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; EC=1.6.99.5 {ECO:0000313|EMBL:CBE69780.1};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
NADH-quinone oxidoreductase subunit K Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKF8_9BACT
PLM3-1_170_b2_sep16_scaffold_962_11
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(9065..9568)
DNA (504bp) protein (168aa)
ndhG; NAD(P)H-quinone oxidoreductase subunit 6 (NAD(P)H dehydrogenase I, chain 6) (NDH-1, chain 6) (EC:1.6.5.-)
NAD(P)H-quinone oxidoreductase chain 6 (NAD(P)H dehydrogenase I, chain 6) (NDH-1, chain 6) {ECO:0000313|EMBL:CBE69781.1}; EC=1.6.5.- {ECO:0000313|EMBL:CBE69781.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
NAD(P)H-quinone oxidoreductase chain 6 (NAD(P)H dehydrogenase I, chain 6) (NDH-1, chain 6) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKF9_9BACT
PLM3-1_170_b2_sep16_scaffold_962_12
CSP1_5_NC10, NC10, Bacteria

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comp(9586..10602)
DNA (1017bp) protein (339aa)
NADH-quinone oxidoreductase subunit H (NADH dehydrogenase I, chain H) (NDH-1, chain H) (EC:1.6.5.3 1.6.99.5) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
NADH-quinone oxidoreductase subunit H (NADH dehydrogenase I, chain H) (NDH-1, chain H) (EC:1.6.5.3 1.6.99.5)
Tax=CSP1_5_NC10
PLM3-1_170_b2_sep16_scaffold_962_13
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(10693..11820)
DNA (1128bp) protein (376aa)
nuoD; NADH-quinone oxidoreductase subunit D (NADH dehydrogenase I, chain D) (NDH-1, chain D) (EC:1.6.5.3 1.6.99.5)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; EC=1.6.99.5 {ECO:0000313|EMBL:CBE69783.1};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
NADH-quinone oxidoreductase subunit D Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKG1_9BACT
PLM3-1_170_b2_sep16_scaffold_962_14
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(11925..12389)
DNA (465bp) protein (155aa)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
NADH-quinone oxidoreductase subunit C Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKG2_9BACT
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_962_15
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(12389..12748)
DNA (360bp) protein (120aa)
nuoA; NADH-quinone oxidoreductase subunit A (NADH dehydrogenase I, chain A) (NDH-1, chain A) (EC:1.6.99.5 1.6.5.3)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; EC=1.6.99.5 {ECO:0000313|EMBL:CBE69785.1};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
NADH-quinone oxidoreductase subunit A Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKG3_9BACT
PLM3-1_170_b2_sep16_scaffold_962_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(12992..13219)
DNA (228bp) protein (76aa)
id=14627313 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3-1_170_b2_sep16_scaffold_962_17
unknown

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13344..14258
DNA (915bp) protein (305aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_962_18
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(14062..15255)
DNA (1194bp) protein (398aa)
hemL; glutamate-1-semialdehyde 2,1-aminomutase (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Glutamate-1-semialdehyde 2,1-aminomutase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKG6_9BACT
Displaying 18 items

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