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PLM3-1_170_b2_sep16_scaffold_11340

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_11340_1
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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3..266
DNA (264bp) protein (88aa)
nifS; cysteine desulfurase (Nitrogenase metalloclusters biosynthesis protein nifS) (EC:2.8.1.7)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000313|EMBL:CBE68667.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Cysteine desulfurase (Nitrogenase metalloclusters biosynthesis protein nifS) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFY6_9BACT
PLM3-1_170_b2_sep16_scaffold_11340_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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332..895
DNA (564bp) protein (188aa)
nqo; NADH-quinone oxidoreductase subunit 6 (NADH dehydrogenase I chain 6) (NDH-1 subunit 6) (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; EC=1.6.99.5 {ECO:0000313|EMBL:CBE68665.1};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
NADH-quinone oxidoreductase subunit B Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFY4_9BACT
PLM3-1_170_b2_sep16_scaffold_11340_3
Leptospirillum ferrooxidans, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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994..1143
DNA (150bp) protein (50aa)
Thiolspecific antioxidant protein Tax=Leptospirillum ferrooxidans (strain C2-3) RepID=I0IQC8_LEPFC
thiolspecific antioxidant protein
Thiolspecific antioxidant protein {ECO:0000313|EMBL:BAM07477.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferrooxidans (strain C2-3).;"
PLM3-1_170_b2_sep16_scaffold_11340_4
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

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1174..1464
DNA (291bp) protein (97aa)
Putative alkyl hydroperoxide reductase bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
putative alkyl hydroperoxide reductase
Tax=GWB2_Chloroflexi_54_36_curated
PLM3-1_170_b2_sep16_scaffold_11340_5
CSP1_5_NC10, NC10, Bacteria

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1503..1742
DNA (240bp) protein (80aa)
hypothetical protein bin=bin3_NC10 species=Methylosinus sp. LW4 genus=Methylosinus taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3-1_170_b2_sep16_scaffold_11340_6
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1702..2025
DNA (324bp) protein (108aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_65_10_curated
PLM3-1_170_b2_sep16_scaffold_11340_7
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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2106..2297
DNA (192bp) protein (64aa)
hypothetical protein Tax=Microchaete sp. PCC 7126 RepID=UPI00034B35BC
hypothetical protein
Tax=CG_Solirubrobact_01
PLM3-1_170_b2_sep16_scaffold_11340_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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2316..2726
DNA (411bp) protein (137aa)
D-proline reductase (Dithiol) {ECO:0000313|EMBL:EFH88373.1}; EC=1.21.4.1 {ECO:0000313|EMBL:EFH88373.1};; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
D-proline reductase (Dithiol) Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TE00_9CHLR
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_11340_9
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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2772..2993
DNA (222bp) protein (74aa)
D-proline reductase (Dithiol) {ECO:0000313|EMBL:EFH88373.1}; EC=1.21.4.1 {ECO:0000313|EMBL:EFH88373.1};; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
D-proline reductase (Dithiol) Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TE00_9CHLR
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_11340_10
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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2990..3451
DNA (462bp) protein (154aa)
nuoI; NADH-quinone oxidoreductase subunit I (NADH dehydrogenase I subunit I) (NDH-1 subunit I) (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; EC=1.6.99.5 {ECO:0000313|EMBL:CBE68664.1};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
NADH-quinone oxidoreductase subunit I Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFY3_9BACT
PLM3-1_170_b2_sep16_scaffold_11340_11
CSP1_5_NC10, NC10, Bacteria

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3645..3980
DNA (336bp) protein (112aa)
cupin domain-containing protein bin=bin3_NC10 species=Myxococcus xanthus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
cupin 2 barrel domain-containing protein
Tax=CSP1_5_NC10
PLM3-1_170_b2_sep16_scaffold_11340_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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4017..4265
DNA (249bp) protein (83aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
protein of unknown function DUF224 cysteine-rich region domain protein
Tax=CSP1_6_Rokubacteria
PLM3-1_170_b2_sep16_scaffold_11340_13
unknown

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4266..4403
DNA (138bp) protein (46aa)

This feature has no annotations

Displaying 13 items

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