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PLM3-1_170_b2_sep16_scaffold_1333

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1333_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

106..588
DNA (483bp) protein (161aa)
Cobalt-precorrin-3 C17-methyltransferase and adenosylcobyric acid synthase Tax=Geobacter metallireducens RepID=Q39YE6_GEOMG
cbiH_cbiP; cobalt-precorrin-3 C17-methyltransferase and adenosylcobyric acid synthase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3-1_170_b2_sep16_scaffold_1333_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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693..2348
DNA (1656bp) protein (552aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Tax=CSP1_6_Rokubacteria
PLM3-1_170_b2_sep16_scaffold_1333_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2348..2950
DNA (603bp) protein (201aa)
sporulation-like repeat-containing protein bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
sporulation domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3-1_170_b2_sep16_scaffold_1333_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

2966..3502
DNA (537bp) protein (179aa)
hprT; hypoxanthine-guanine phosphoribosyltransferase; K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] bin=bin7_NC10_sister species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hprT; hypoxanthine-guanine phosphoribosyltransferase
Tax=CSP1_6_Rokubacteria
PLM3-1_170_b2_sep16_scaffold_1333_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

3596..5422
DNA (1827bp) protein (609aa)
ftsH; cell division protein FtsH; ATP-dependent zinc-metallo protease (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM3-1_170_b2_sep16_scaffold_1333_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

5633..6478
DNA (846bp) protein (282aa)
Dihydropteroate synthase bin=GWC2_Methylomirabilis_70_16 species=Thermogladius cellulolyticus genus=Thermogladius taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
dihydropteroate synthase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3-1_170_b2_sep16_scaffold_1333_7
unknown

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comp(6598..7026)
DNA (429bp) protein (143aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1333_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

7103..7768
DNA (666bp) protein (222aa)
Phosphoglucosamine mutase bin=GWF2_Methylomirabilis_70_14 species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphoglucosamine mutase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3-1_170_b2_sep16_scaffold_1333_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

7765..8190
DNA (426bp) protein (142aa)
Holo-[acyl-carrier-protein] synthase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
holo-acyl-carrier-protein synthase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3-1_170_b2_sep16_scaffold_1333_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

8174..8920
DNA (747bp) protein (249aa)
id=4870785 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM3-1_170_b2_sep16_scaffold_1333_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

8925..10484
DNA (1560bp) protein (520aa)
Putative uncharacterized protein yjeF bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
yjeF; carbohydrate kinase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3-1_170_b2_sep16_scaffold_1333_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

10477..10920
DNA (444bp) protein (148aa)
hypothetical protein; K06925 UPF0079 ATP-binding protein bin=bin7_NC10_sister species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3-1_170_b2_sep16_scaffold_1333_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

10965..11651
DNA (687bp) protein (229aa)
DNA repair protein RadC; K03630 DNA repair protein RadC bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=bin7_NC10_sister organism_group=NC10
DNA repair protein RadC
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3-1_170_b2_sep16_scaffold_1333_14
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(11688..11930)
DNA (243bp) protein (81aa)
id=14627932 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
PLM3-1_170_b2_sep16_scaffold_1333_15
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(12246..13286)
DNA (1041bp) protein (347aa)
dihydroorotate dehydrogenase (EC:1.3.98.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] bin=bin7_NC10_sister species=Mycobacterium sp. 155 genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
diguanylate cyclase
Tax=CSP1_6_Rokubacteria
PLM3-1_170_b2_sep16_scaffold_1333_16
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

13343..13852
DNA (510bp) protein (170aa)
hypothetical protein; K09122 hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM3-1_170_b2_sep16_scaffold_1333_17
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(13942..14517)
DNA (576bp) protein (192aa)
hypothetical protein Tax=Sulfobacillus thermosulfidooxidans RepID=UPI0002DDF812
LysR family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_1333_18
R_NC10_66_22, NC10, Bacteria

Not on your lists

14600..15520
DNA (921bp) protein (307aa)
coenzyme A transferase; K01039 glutaconate CoA-transferase, subunit A [EC:2.8.3.12] bin=bin9_gal15 species=Catenulispora acidiphila genus=Catenulispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
coenzyme A transferase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_1333_19
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

15534..16310
DNA (777bp) protein (259aa)
glutaconate CoA-transferase (EC:2.8.3.12); K01040 glutaconate CoA-transferase, subunit B [EC:2.8.3.12] bin=bin9_gal15 species=Catenulispora acidiphila genus=Catenulispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
glutaconate CoA-transferase (EC:2.8.3.12)
Tax=CSP1_3_Armatimonadetes
PLM3-1_170_b2_sep16_scaffold_1333_20
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

16329..17174
DNA (846bp) protein (282aa)
citrate synthase; K01647 citrate synthase [EC:2.3.3.1] bin=bin9_gal15 species=Sciscionella marina genus=Sciscionella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
citrate synthase
Tax=CSP1_3_Armatimonadetes
PLM3-1_170_b2_sep16_scaffold_1333_21
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

17221..18672
DNA (1452bp) protein (484aa)
aldehyde dehydrogenase (EC:1.2.1.3)
aldehyde dehydrogenase Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI0002884D19
Tax=CSP1_3_Armatimonadetes
PLM3-1_170_b2_sep16_scaffold_1333_22
unknown

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19676..19825
DNA (150bp) protein (50aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1333_23
unknown

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19833..20165
DNA (333bp) protein (111aa)

This feature has no annotations

Displaying 23 items

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