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PLM3-1_170_b2_sep16_scaffold_9246

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_9246_1
R_NC10_66_22, NC10, Bacteria

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comp(3..599)
DNA (597bp) protein (199aa)
alpha-2-macroglobulin domain-containing protein 2; K06894 bin=bin1_lowGC species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
alpha-2-macroglobulin domain-containing protein 2
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_9246_2
R_NC10_66_22, NC10, Bacteria

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comp(539..1675)
DNA (1137bp) protein (379aa)
alpha-2-macroglobulin domain-containing protein 2; K06894 bin=bin5_DeltaP species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
alpha-2-macroglobulin domain-containing protein 2
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_9246_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(1685..2071)
DNA (387bp) protein (129aa)
Thioesterase superfamily protein bin=GWF2_Methylomirabilis_70_14 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE68578.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_170_b2_sep16_scaffold_9246_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(2084..2479)
DNA (396bp) protein (132aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFP7_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE68578.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_170_b2_sep16_scaffold_9246_5
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2694..3668
DNA (975bp) protein (325aa)
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase; K00015 glyoxylate reductase [EC:1.1.1.26] bin=bin3_NC10 species=Thermotoga lettingae genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=bin3_NC10 organism_group=NC10
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein (EC:1.1.1.26)
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM3-1_170_b2_sep16_scaffold_9246_6
unknown

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3882..4058
DNA (177bp) protein (59aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_9246_7
uncultured Acetothermia bacterium, Acetothermia, Bacteria

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4094..4351
DNA (258bp) protein (86aa)
Putative uncharacterized protein Tax=uncultured candidate division OP1 bacterium RepID=H5SUG5_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:BAL52993.1}; species="Bacteria; Acetothermia; environmental samples.;" source="uncultured Acetothermia bacterium.;"
AbrB family transcriptional regulator
PLM3-1_170_b2_sep16_scaffold_9246_8
uncultured Acetothermia bacterium, Acetothermia, Bacteria

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4353..4619
DNA (267bp) protein (89aa)
Hypothetical conserved protein Tax=uncultured candidate division OP1 bacterium RepID=H5SUG6_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:BAL52994.1}; species="Bacteria; Acetothermia; environmental samples.;" source="uncultured Acetothermia bacterium.;"
PLM3-1_170_b2_sep16_scaffold_9246_9
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

4779..5195
DNA (417bp) protein (139aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHX0_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69261.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_170_b2_sep16_scaffold_9246_10
unknown

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comp(5084..5377)
DNA (294bp) protein (98aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_9246_11
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

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5406..5897
DNA (492bp) protein (164aa)
Putative uncharacterized protein bin=GWA2_Elusimicrobia_69_24 species=Chlorobium phaeobacteroides genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=GWA2_Elusimicrobia_69_24_curated
PLM3-1_170_b2_sep16_scaffold_9246_12
unknown

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5926..6222
DNA (297bp) protein (99aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_9246_13
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6473..7126)
DNA (654bp) protein (218aa)
hypothetical protein bin=bin7_NC10_sister species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3-1_170_b2_sep16_scaffold_9246_14
CSP1_5_NC10, NC10, Bacteria

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7354..8844
DNA (1491bp) protein (497aa)
putative FAD-binding protein bin=bin3_NC10 species=Rheinheimera perlucida genus=Rheinheimera taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3-1_170_b2_sep16_scaffold_9246_15
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

9013..9996
DNA (984bp) protein (328aa)
C1 family peptidase domain protein Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7ALI8_GEOSK
C1 family peptidase domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Displaying 15 items

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