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PLM3-1_170_b2_sep16_scaffold_71786

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Displaying 3 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_71786_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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3..236
DNA (234bp) protein (78aa)
Transposase Tax=Candidatus Nitrospira defluvii RepID=D8PEA4_9BACT
transposase
Transposase {ECO:0000313|EMBL:CBK41563.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3-1_170_b2_sep16_scaffold_71786_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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375..1163
DNA (789bp) protein (263aa)
valS; Valyl-tRNA synthetase (Valine--tRNA ligase) (EC:6.1.1.9)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Valine--tRNA ligase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKT5_9BACT
Suspect SCG annotation. See neighboring gene [PLM3-1_170_b2_sep16_scaffold_71786_3].
PLM3-1_170_b2_sep16_scaffold_71786_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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1210..2703
DNA (1494bp) protein (498aa)
valS; Valyl-tRNA synthetase (Valine--tRNA ligase) (EC:6.1.1.9)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Valine--tRNA ligase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKT5_9BACT
Displaying 3 items

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