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PLM3-1_200_b1_sep16_scaffold_433

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_433_1

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comp(134..964)
DNA (831bp) protein (277aa)
hypothetical protein Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00035D6406
Marine sediment metagenome DNA, contig: S01H1_L00966 {ECO:0000313|EMBL:GAF72826.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transposase
PLM3-1_200_b1_sep16_scaffold_433_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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1747..3105
DNA (1359bp) protein (453aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML92_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67758.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_200_b1_sep16_scaffold_433_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(3283..3966)
DNA (684bp) protein (228aa)
cysE; serine acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441, ECO:0000313|EMBL:CBE67768.1}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441, ECO:0000313|EMBL:CBE67768.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Serine acetyltransferase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLA2_9BACT
PLM3-1_200_b1_sep16_scaffold_433_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(3980..4183)
DNA (204bp) protein (68aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLA1_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67767.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_200_b1_sep16_scaffold_433_5
R_NC10_66_22, NC10, Bacteria

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4418..5074
DNA (657bp) protein (219aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
HhH-GPD family protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_200_b1_sep16_scaffold_433_6
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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5071..6588
DNA (1518bp) protein (506aa)
Putative Uncharacterized domain HDIG Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLA0_9BACT
hypothetical protein
Putative Uncharacterized domain HDIG {ECO:0000313|EMBL:CBE67766.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_200_b1_sep16_scaffold_433_trna_1
unknown

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6623..6694
DNA (72bp)
transferRNA Gly
PLM3-1_200_b1_sep16_scaffold_433_7
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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6774..7595
DNA (822bp) protein (274aa)
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
PLM3-1_200_b1_sep16_scaffold_433_8
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

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7592..8533
DNA (942bp) protein (314aa)
Methyltransferase bin=GWC2_CP_Nitrospirae-rel_42_7 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
methyltransferase
Tax=RIFOXYC12_FULL_TA06_54_24_curated
PLM3-1_200_b1_sep16_scaffold_433_9
uncultured myxobacterium HF0200_01L06, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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8858..9202
DNA (345bp) protein (115aa)
Ferredoxin Tax=uncultured myxobacterium HF0200_01L06 RepID=E7C3I0_9DELT
Ferredoxin {ECO:0000313|EMBL:ADI22004.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; environmental samples.;" source="uncultured myxobacterium HF0200_01L06.;"
4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein
PLM3-1_200_b1_sep16_scaffold_433_10
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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9353..10612
DNA (1260bp) protein (420aa)
6-phosphofructokinase (EC:2.7.1.11)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01979}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01979};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01979}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01979}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01979}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
6-phosphofructokinase Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI0003627BCA
PLM3-1_200_b1_sep16_scaffold_433_11
unknown

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10656..10949
DNA (294bp) protein (98aa)

This feature has no annotations

PLM3-1_200_b1_sep16_scaffold_433_12
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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11105..11689
DNA (585bp) protein (195aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML98_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67764.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_200_b1_sep16_scaffold_433_13
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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11749..12057
DNA (309bp) protein (103aa)
dioxygenase, ferredoxin subunit bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin1_lowGC organism_group=Unknown_CP
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_433_14
unknown

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12277..12642
DNA (366bp) protein (122aa)

This feature has no annotations

PLM3-1_200_b1_sep16_scaffold_433_15
unknown

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12756..13220
DNA (465bp) protein (155aa)

This feature has no annotations

PLM3-1_200_b1_sep16_scaffold_433_16
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(13254..14018)
DNA (765bp) protein (255aa)
coenzyme F420-0 gamma-glutamyl ligase; K12234 coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
coenzyme F420-0 gamma-glutamyl ligase (EC:6.3.2.-)
Tax=CSP1_6_Rokubacteria
PLM3-1_200_b1_sep16_scaffold_433_17
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(13999..14664)
DNA (666bp) protein (222aa)
phospholactate guanylyltransferase (EC:2.7.7.-); K14941 2-phospho-L-lactate guanylyltransferase [EC:2.7.7.68] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_200_b1_sep16_scaffold_433_18
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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comp(14661..15599)
DNA (939bp) protein (313aa)
2-phospho-L-lactate transferase bin=GWF2_Methylomirabilis_70_14 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cofD; LPPG:FO 2-phospho-L-lactate transferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3-1_200_b1_sep16_scaffold_433_19
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(15596..16132)
DNA (537bp) protein (179aa)
NADPH-dependent F420 reductase Tax=uncultured Acidobacteria bacterium RepID=H5SDD4_9BACT
NADPH-dependent F420 reductase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_200_b1_sep16_scaffold_433_20
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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comp(16255..17310)
DNA (1056bp) protein (352aa)
cofH; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase (EC:2.5.1.-)
FO synthase subunit 2 bin=GWF2_Methylomirabilis_70_14 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
Displaying 21 items

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