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PLM3-1_200_b1_sep16_scaffold_990

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_990_1
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3..269
DNA (267bp) protein (89aa)
50S ribosomal protein L11 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rplK; 50S ribosomal protein L11
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b1_sep16_scaffold_990_2
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


361..1065
DNA (705bp) protein (235aa)
50S ribosomal protein L1 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
50S ribosomal protein L1
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b1_sep16_scaffold_990_3
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1080..1634
DNA (555bp) protein (185aa)
50S ribosomal protein L10 bin=GWD2_Deltaproteobacteria_55_8 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
50S ribosomal protein L10
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b1_sep16_scaffold_990_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1685..2059
DNA (375bp) protein (125aa)
50S ribosomal protein L7/L12 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rplL; 50S ribosomal protein L7/L12
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b1_sep16_scaffold_990_5
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2138..6247
DNA (4110bp) protein (1370aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta Tax=Geobacter uraniireducens (strain Rf4) RepID=RPOB_GEOUR
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b1_sep16_scaffold_990_6
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6268..10308
DNA (4041bp) protein (1347aa)
DNA-directed RNA polymerase subunit beta' bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rpoC; DNA-directed RNA polymerase subunit beta'
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b1_sep16_scaffold_990_7
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10793..11263
DNA (471bp) protein (157aa)
30S ribosomal protein S7 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ribosomal protein S7, bacterial/organelle
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_200_b1_sep16_scaffold_990_8
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11336..13408
DNA (2073bp) protein (691aa)
Elongation factor G bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
fusA-3; translation elongation factor G
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_200_b1_sep16_scaffold_990_9
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13442..14278
DNA (837bp) protein (279aa)
50S ribosomal protein L3 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfovibrio vulgaris genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rplC; ribosomal protein L3 (BL3)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b1_sep16_scaffold_990_10
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


14684..14968
DNA (285bp) protein (95aa)
50S ribosomal protein L4 Tax=Thermodesulfatator atlanticus RepID=UPI0003B6AE99
50S ribosomal protein L4/L1e
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b1_sep16_scaffold_990_11
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


15053..15391
DNA (339bp) protein (113aa)
50S ribosomal protein L23 Tax=unclassified Aminicenantes RepID=UPI0003B59EFD
ribosomal protein L23
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b1_sep16_scaffold_990_12
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


15448..15996
DNA (549bp) protein (183aa)
50S ribosomal protein L2 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R8I7_AMMDK
50S ribosomal protein L2
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_200_b1_sep16_scaffold_990_13
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16166..16573
DNA (408bp) protein (136aa)
30S ribosomal protein S19 Tax=Bilophila RepID=E5Y772_BILWA
rpsS; 30S ribosomal protein S19
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b1_sep16_scaffold_990_14
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16672..17007
DNA (336bp) protein (112aa)
50S ribosomal protein L22 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RE99_DESPD
50S ribosomal protein L22
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_200_b1_sep16_scaffold_990_15
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17013..17675
DNA (663bp) protein (221aa)
30S ribosomal protein S3
30S ribosomal protein S3 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b1_sep16_scaffold_990_16
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17859..18206
DNA (348bp) protein (116aa)
50S ribosomal protein L16 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rplP; 50S ribosomal protein L16
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_200_b1_sep16_scaffold_990_17
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


18196..18396
DNA (201bp) protein (67aa)
50S ribosomal protein L29 bin=GWD2_Deltaproteobacteria_55_8 species=Sulfobacillus acidophilus genus=Sulfobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
50S ribosomal protein L29
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b1_sep16_scaffold_990_18
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


18460..18807
DNA (348bp) protein (116aa)
30S ribosomal protein S17 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
30S ribosomal protein S17
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_200_b1_sep16_scaffold_990_19
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


18804..19172
DNA (369bp) protein (123aa)
50S ribosomal protein L14 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rplN; 50S ribosomal protein L14
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b1_sep16_scaffold_990_20
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


19394..19666
DNA (273bp) protein (91aa)
50S ribosomal protein L24 bin=GWD2_Deltaproteobacteria_55_8 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rplX; 50S ribosomal protein L24
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_200_b1_sep16_scaffold_990_21
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


19620..20192
DNA (573bp) protein (191aa)
50S ribosomal protein L5 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
50S ribosomal protein L5
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b1_sep16_scaffold_990_22
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


20522..20920
DNA (399bp) protein (133aa)
30S ribosomal protein S8 bin=GWD2_Deltaproteobacteria_55_8 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rpsH; 30S ribosomal protein S8
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_200_b1_sep16_scaffold_990_23
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


21048..21599
DNA (552bp) protein (184aa)
50S ribosomal protein L6 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rplF; 50S ribosomal protein L6
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_200_b1_sep16_scaffold_990_24
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


21828..22241
DNA (414bp) protein (138aa)
50S ribosomal protein L18 bin=GWD2_Deltaproteobacteria_55_8 species=Thermotoga thermarum genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
50S ribosomal protein L18
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_200_b1_sep16_scaffold_990_25
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


22282..22779
DNA (498bp) protein (166aa)
30S ribosomal protein S5 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rpsE; 30S ribosomal protein S5
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b1_sep16_scaffold_990_26
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


22959..23243
DNA (285bp) protein (95aa)
50S ribosomal protein L15 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rplO; 50S ribosomal protein L15
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_200_b1_sep16_scaffold_990_27
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


23236..24555
DNA (1320bp) protein (440aa)
Protein translocase subunit SecY Tax=Desulfococcus multivorans DSM 2059 RepID=S7T9D4_DESML
secY; preprotein translocase subunit SecY
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b1_sep16_scaffold_990_28
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24559..25206
DNA (648bp) protein (216aa)
adenylate kinase (EC:2.7.4.3)
Adenylate kinase bin=GWD2_Deltaproteobacteria_55_8 species=Archaeoglobus veneficus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b1_sep16_scaffold_990_29
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25209..25967
DNA (759bp) protein (253aa)
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase bin=GWD2_Deltaproteobacteria_55_8 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b1_sep16_scaffold_990_30
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26010..26279
DNA (270bp) protein (90aa)
Translation initiation factor IF-1 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
infA; translation initiation factor IF-1
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Displaying 30 items

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