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PLM3-1_200_b1_sep16_scaffold_2861

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_2861_1
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..233)
DNA (231bp) protein (77aa)
Peptide chain release factor 1 bin=GWD2_Deltaproteobacteria_55_8 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
prfA; peptide chain release factor 1
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_200_b1_sep16_scaffold_2861_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(568..771)
DNA (204bp) protein (68aa)
50S ribosomal protein L31 bin=GWD2_Deltaproteobacteria_55_8 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
50S ribosomal protein L31
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b1_sep16_scaffold_2861_3
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1021..1494
DNA (474bp) protein (158aa)
Diguanylate cyclase (GGDEF) domain-containing protein bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
response regulator receiver protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b1_sep16_scaffold_2861_4
unknown

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1692..2678
DNA (987bp) protein (329aa)

This feature has no annotations

PLM3-1_200_b1_sep16_scaffold_2861_5
unknown

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2692..2946
DNA (255bp) protein (85aa)

This feature has no annotations

PLM3-1_200_b1_sep16_scaffold_2861_6
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2936..3466)
DNA (531bp) protein (177aa)
Uncharacterized protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RJV8_ACCPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV36799.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
PLM3-1_200_b1_sep16_scaffold_2861_trna_1
unknown

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comp(4098..4176)
DNA (79bp)
transferRNA Ala
PLM3-1_200_b1_sep16_scaffold_2861_7
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4984..5352
DNA (369bp) protein (123aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IKL5_9PLAN
Calcium binding protein from Anabaena CcbP
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
PLM3-1_200_b1_sep16_scaffold_2861_8
Pelodictyon phaeoclathratiforme, Pelodictyon, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

5496..5912
DNA (417bp) protein (139aa)
Putative uncharacterized protein Tax=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) RepID=B4SEM2_PELPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF43114.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Pelodictyon.;" source="Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1).;"
PLM3-1_200_b1_sep16_scaffold_2861_9
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5971..6294
DNA (324bp) protein (108aa)
Putative uncharacterized protein Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XZI3_LEPCP
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM3-1_200_b1_sep16_scaffold_2861_10
Desulfonatronum thiodismutans, Desulfonatronum, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6869..8221
DNA (1353bp) protein (451aa)
Uncharacterized protein {ECO:0000313|EMBL:AIE18050.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfonatronumaceae; Desulfonatronum.;" source="Desulfonatronum thiodismutans.;"
ATPase bin=GWA2_Deltaproteo_65_63 species=Chlorobium ferrooxidans genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein
PLM3-1_200_b1_sep16_scaffold_2861_11
RLO_PLX_64_10, Bacteria

Not on your lists

8218..8400
DNA (183bp) protein (61aa)
Putative ATP-dependent helicase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I9J3_CALAS
putative ATP-dependent helicase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_200_b1_sep16_scaffold_2861_12
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8593..9984)
DNA (1392bp) protein (464aa)
DNA repair ATPase RecN bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
DNA recombination protein RecN
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_200_b1_sep16_scaffold_2861_13
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10047..10235)
DNA (189bp) protein (63aa)
DNA repair ATPase RecN bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
DNA repair protein RecN
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b1_sep16_scaffold_2861_14
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10293..11144)
DNA (852bp) protein (284aa)
Probable inorganic polyphosphate/ATP-NAD kinase bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
inorganic polyphosphate kinase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_200_b1_sep16_scaffold_2861_15
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11262..11489
DNA (228bp) protein (76aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Displaying 16 items

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