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PLM3-1_200_b1_sep16_scaffold_1853

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_1853_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..734)
DNA (732bp) protein (244aa)
Acylneuraminate cytidylyltransferase bin=GWB2_Nitrospirae_rel_47_37 species=Arcobacter sp. L genus=Arcobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
neuA; acylneuraminate cytidylyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3-1_200_b1_sep16_scaffold_1853_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(794..2524)
DNA (1731bp) protein (577aa)
Putative uncharacterized protein bin=GWB2_Nitrospirae_rel_47_37 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Radical SAM domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3-1_200_b1_sep16_scaffold_1853_3
R_RIF_OD1_07_45_25, RIF-OD1-7, Parcubacteria, Bacteria

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comp(2583..3341)
DNA (759bp) protein (253aa)
Imidazole glycerol phosphate synthase cyclase subunit (EC:4.1.3.-)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA300-N18 RepID=UPI00037A4EEB
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_07_45_25_curated
PLM3-1_200_b1_sep16_scaffold_1853_4

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comp(3556..4173)
DNA (618bp) protein (206aa)
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH Tax=Roseburia intestinalis CAG:13 RepID=R6B9V6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KKN46137.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3-1_200_b1_sep16_scaffold_1853_5
CG_Omnitr_03, Omnitrophica, Bacteria

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comp(4170..5369)
DNA (1200bp) protein (400aa)
pseudaminic acid biosynthesis PseA protein Tax=Anaeromusa acidaminophila RepID=UPI000374572E
Pseudaminic acid biosynthesis protein PseA,possible Pse5Ac7Ac acetamidino synthase
Tax=CG_Omnitr_03
PLM3-1_200_b1_sep16_scaffold_1853_6
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5402..5947)
DNA (546bp) protein (182aa)
pseudaminic acid biosynthesis-associated protein PseG Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI00024841CF
N-acetyltransferase GCN5
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
PLM3-1_200_b1_sep16_scaffold_1853_7
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5907..6953)
DNA (1047bp) protein (349aa)
N-acetylneuraminate synthase (EC:2.5.1.56)
N-acetylneuraminate synthase {ECO:0000313|EMBL:AEH36988.1}; EC=2.5.1.56 {ECO:0000313|EMBL:AEH36988.1};; species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6).;"
N-acetylneuraminate synthase Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DAP6_HALXS
PLM3-1_200_b1_sep16_scaffold_1853_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(6950..8866)
DNA (1917bp) protein (639aa)
UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase (EC:2.6.1.50)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037F8D20
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3-1_200_b1_sep16_scaffold_1853_9
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(8836..9816)
DNA (981bp) protein (327aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000362F7D2
UDP-N-acetylglucosamine 4,6-dehydratase
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3-1_200_b1_sep16_scaffold_1853_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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comp(9827..10834)
DNA (1008bp) protein (336aa)
NAD-dependent epimerase/dehydratase bin=GWF2_Lentisphaerae_49_21 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
NAD-dependent epimerase/dehydratase
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3-1_200_b1_sep16_scaffold_1853_11
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10831..11904)
DNA (1074bp) protein (358aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
dTDP-glucose 4,6-dehydratase Tax=Anaeromyxobacter sp. (strain K) RepID=B4UJP7_ANASK
dTDP-glucose 4,6-dehydratase
PLM3-1_200_b1_sep16_scaffold_1853_12
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11911..12393)
DNA (483bp) protein (161aa)
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3ADG0_CARHZ
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b1_sep16_scaffold_1853_13
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12486..12989)
DNA (504bp) protein (168aa)
Glucose-1-phosphate thymidyltransferase bin=GWD2_Deltaproteobacteria_55_8 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
glucose-1-phosphate thymidyltransferase
Tax=GWD2_Deltaproteobacteria_55_8_curated
Displaying 13 items

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