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PLM3-1_200_b1_sep16_scaffold_737

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_737_1
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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462..1028
DNA (567bp) protein (189aa)
id=14425191 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_737_2
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1040..1465
DNA (426bp) protein (142aa)
hypothetical protein Tax=Dyella japonica RepID=UPI0002F7860B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX14331.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
PLM3-1_200_b1_sep16_scaffold_737_3
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(1592..1966)
DNA (375bp) protein (125aa)
hypothetical protein bin=bin1_lowGC species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3-1_200_b1_sep16_scaffold_737_4
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(2099..2602)
DNA (504bp) protein (168aa)
id=14425347 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_737_5
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(2795..4819)
DNA (2025bp) protein (675aa)
Cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase Tax=Pedosphaera parvula Ellin514 RepID=B9XCD1_9BACT
Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain protein
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3-1_200_b1_sep16_scaffold_737_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(5003..5857)
DNA (855bp) protein (285aa)
apurinic endonuclease APN1 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Parcubacteria tax=bin1_lowGC organism_group=Unknown_CP
apurinic endonuclease APN1
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_737_7
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

6055..6603
DNA (549bp) protein (183aa)
Arginine decarboxylase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQA5_KORVE
pyruvoyl-dependent arginine decarboxylase
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3-1_200_b1_sep16_scaffold_737_8
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(6623..8281)
DNA (1659bp) protein (553aa)
DNA replication and repair protein RecN bin=GWC2_Nitrospirae_57_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
DNA recombination protein RecN
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3-1_200_b1_sep16_scaffold_737_9
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(8287..9636)
DNA (1350bp) protein (450aa)
RNA polymerase, sigma 70 subunit, RpoD subfamily; K03086 RNA polymerase primary sigma factor bin=bin1_lowGC species=Oscillibacter sp. CAG:155 genus=Oscillibacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
RpoD subfamily RNA polymerase sigma-70 subunit
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3-1_200_b1_sep16_scaffold_737_10
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(9658..10950)
DNA (1293bp) protein (431aa)
gamma-glutamyl phosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase bin=GWC2_Deltaproteobacteria_55_46 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3-1_200_b1_sep16_scaffold_737_11
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

11175..12560
DNA (1386bp) protein (462aa)
GabT; 4-aminobutyrate aminotransferase and related aminotransferases; K07250 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase [EC:2.6.1.19 2.6.1.22] bin=bin1_lowGC species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
GabT; 4-aminobutyrate aminotransferase and related aminotransferases
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_737_12
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

12642..13676
DNA (1035bp) protein (345aa)
gbsA; glycine betaine aldehyde dehydrogenase (EC:1.2.1.8) bin=bin1_lowGC species=Brevibacillus borstelensis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
Displaying 12 items

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