ggKbase home page

PLM3-1_200_b1_sep16_scaffold_21626

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_21626_1
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists


1..141
DNA (141bp) protein (47aa)
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 bin=bin1_lowGC species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_21626_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists


291..971
DNA (681bp) protein (227aa)
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 bin=bin1_lowGC species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
30S ribosomal protein S1
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_21626_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

994..1443
DNA (450bp) protein (150aa)
sppA; signal peptide peptidase SppA, 67K type; K04773 protease IV [EC:3.4.21.-] bin=bin1_lowGC species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
Signal peptide peptidase SppA, 36K type (EC:3.1.3.26)
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_21626_4
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

1533..1901
DNA (369bp) protein (123aa)
sppA; signal peptide peptidase SppA, 67K type; K04773 protease IV [EC:3.4.21.-] bin=bin1_lowGC species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
signal peptide peptidase SppA, 36K type (EC:3.1.3.2)
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_21626_5
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

1904..2389
DNA (486bp) protein (162aa)
Histidine triad (HIT) protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Marinimicrobia tax=bin1_lowGC organism_group=Unknown_CP
hit family protein
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_21626_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

2393..2755
DNA (363bp) protein (121aa)
Uncharacterized protein bin=bin1_lowGC species=Desulfovibrio sp. X2 genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_21626_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

2826..3755
DNA (930bp) protein (310aa)
lipA; lipoate synthase (EC:2.8.1.-); K03644 lipoic acid synthetase [EC:2.8.1.8] bin=bin1_lowGC species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
lipoic acid synthetase
Tax=CSP1_2_Dadabacteria
Displaying 7 items

View Taxonomy