ggKbase home page

PLM3-1_200_b1_sep16_scaffold_3529

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_3529_1
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(17..1315)
DNA (1299bp) protein (433aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] bin=bin1_lowGC species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=bin1_lowGC organism_group=Unknown_CP
tRNA (guanine-N(1)-)-methyltransferase
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_3529_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(1359..1865)
DNA (507bp) protein (169aa)
rimM; 16S rRNA processing protein RimM bin=bin1_lowGC species=Clostridium sp. CAG:780 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
rimM; 16S rRNA processing protein RimM
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_3529_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(1885..2124)
DNA (240bp) protein (80aa)
hypothetical protein; K06960 bin=bin1_lowGC species=Desulfovibrio vulgaris genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_3529_4
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists


comp(2183..2416)
DNA (234bp) protein (78aa)
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 bin=bin1_lowGC species=Thermodesulfobacterium thermophilum genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin1_lowGC organism_group=Unknown_CP
rpsP; 30S ribosomal protein S16
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3-1_200_b1_sep16_scaffold_3529_5
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists


comp(2467..3801)
DNA (1335bp) protein (445aa)
signal recognition particle subunit FFH/SRP54 (srp54); K03106 signal recognition particle subunit SRP54 bin=bin1_lowGC species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
signal recognition particle protein
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3-1_200_b1_sep16_scaffold_3529_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(3972..4184)
DNA (213bp) protein (71aa)
id=14425486 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_3529_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(4441..4899)
DNA (459bp) protein (153aa)
Heat shock protein Hsp20 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
molecular chaperone
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_3529_8
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

5165..5845
DNA (681bp) protein (227aa)
Uncharacterized protein Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q527_9BACT
Uncharacterized protein {ECO:0000313|EMBL:GAN31586.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
hypothetical protein
Displaying 8 items

View Taxonomy