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PLM3-1_200_b2_sep16_scaffold_461

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b2_sep16_scaffold_461_1
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(361..1536)
DNA (1176bp) protein (392aa)
Putative transposase bin=GWB2_Desulfobacterales_56_26 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
transposase
Tax=RBG_13_OP8X_37_8_curated
PLM3-1_200_b2_sep16_scaffold_461_2
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(1555..2046)
DNA (492bp) protein (164aa)
Integrase family protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RME0_ACCPU
integrase family protein
Tax=RBG_13_OP8X_37_8_curated
PLM3-1_200_b2_sep16_scaffold_461_3
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3016..3228)
DNA (213bp) protein (71aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_200_b2_sep16_scaffold_461_4
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3232..3693)
DNA (462bp) protein (154aa)
Putative uncharacterized protein Tax=Beggiatoa sp. PS RepID=A7BXU2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EDN68645.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
hypothetical protein
PLM3-1_200_b2_sep16_scaffold_461_5
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3764..4507)
DNA (744bp) protein (248aa)
oxidoreductase Tax=Nocardiopsis ganjiahuensis RepID=UPI000346D3C2
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADH68892.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 /; JCM 7437 / NCTC 10488) (Actinomadura dassonvillei).;"
PLM3-1_200_b2_sep16_scaffold_461_6
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4509..5381)
DNA (873bp) protein (291aa)
rhodanese; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] bin=bin3_NC10 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
rhodanese domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b2_sep16_scaffold_461_7
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5385..6491
DNA (1107bp) protein (369aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b2_sep16_scaffold_461_8
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6537..6848
DNA (312bp) protein (104aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b2_sep16_scaffold_461_9
unknown

Not on your lists

comp(6994..7503)
DNA (510bp) protein (170aa)

This feature has no annotations

PLM3-1_200_b2_sep16_scaffold_461_10
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

Not on your lists

comp(7527..8141)
DNA (615bp) protein (205aa)
Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
PLM3-1_200_b2_sep16_scaffold_461_11
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8427..9860
DNA (1434bp) protein (478aa)
tRNA(Ile)-lysidine synthetase bin=GWD2_Deltaproteobacteria_55_8 species=Paenibacillus elgii genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
tRNA(Ile)-lysidine synthetase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_200_b2_sep16_scaffold_461_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9910..11745
DNA (1836bp) protein (612aa)
ATP-dependent zinc metalloprotease FtsH bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ftsH-2; cell division ATP-dependent zinc protease FtsH
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b2_sep16_scaffold_461_13
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11907..12806
DNA (900bp) protein (300aa)
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MLK9_9BACT
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b2_sep16_scaffold_461_14
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12799..13551
DNA (753bp) protein (251aa)
Uncharacterized protein Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JY23_DESAC
membrane protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b2_sep16_scaffold_461_15
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13548..14492
DNA (945bp) protein (315aa)
hypothetical protein Tax=Thermodesulfatator atlanticus RepID=UPI0003B464E2
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b2_sep16_scaffold_461_16
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14489..15958
DNA (1470bp) protein (490aa)
phosphoglucosamine mutase Tax=Geopsychrobacter electrodiphilus RepID=UPI00037C72CD
glmM; phosphoglucosamine mutase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b2_sep16_scaffold_461_17
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16056..16763
DNA (708bp) protein (236aa)
pyridoxine 5''''-phosphate synthase Tax=Methylohalobius crimeensis RepID=UPI0003B5B4F3
pyridoxine 5'-phosphate synthase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b2_sep16_scaffold_461_18
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16811..18250
DNA (1440bp) protein (480aa)
carbohydrate kinase bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
carbohydrate kinase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b2_sep16_scaffold_461_19
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18250..18738
DNA (489bp) protein (163aa)
Nucleoid maintenance ATPase YjeE Tax=Geobacter metallireducens RepID=Q39UG4_GEOMG
yjeE; nucleoid maintenance ATPase YjeE
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_200_b2_sep16_scaffold_461_20
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18751..19974
DNA (1224bp) protein (408aa)
aspartate kinase; K00928 aspartate kinase [EC:2.7.2.4] bin=GWC2_NOV_55_46 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
aspartate kinase (EC:2.7.2.4)
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_200_b2_sep16_scaffold_461_21
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19971..21551
DNA (1581bp) protein (527aa)
2-isopropylmalate synthase/homocitrate synthase family protein bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
transferase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b2_sep16_scaffold_461_22
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21548..22279
DNA (732bp) protein (244aa)
serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase Tax=Flexistipes sinusarabici (strain DSM 4947 / MAS 10) RepID=F8E5H0_FLESM
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b2_sep16_scaffold_461_23
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

22483..22911
DNA (429bp) protein (143aa)
hypothetical protein Tax=Thioalkalivibrio sp. ALMg11 RepID=UPI00038080CE
DNA methylase N-4/N-6 domain-containing protein
Tax=RBG_16_Acidobacteria_64_8_curated
Displaying 23 items

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