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PLM3-1_200_b2_sep16_scaffold_541

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b2_sep16_scaffold_541_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..148)
DNA (147bp) protein (49aa)
Iron complex ABC transporter permease bin=GWD2_Deltaproteobacteria_55_8 species=uncultured archaeon W5-61a genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b2_sep16_scaffold_541_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(564..1301)
DNA (738bp) protein (246aa)
ABC transporter ATP-binding protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Caldiarchaeum subterraneum genus=Candidatus Caldiarchaeum taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b2_sep16_scaffold_541_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1310..1555)
DNA (246bp) protein (82aa)
ABC transporter ATP-binding protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Caldiarchaeum subterraneum genus=Candidatus Caldiarchaeum taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Thiamin ABC transporter, ATPase component
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b2_sep16_scaffold_541_4
GWC2_OD1_53_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

1890..2120
DNA (231bp) protein (77aa)
Uncharacterized protein Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4Q7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKW34687.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWC2_53_7.;"
hypothetical protein
PLM3-1_200_b2_sep16_scaffold_541_5
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2665..2877
DNA (213bp) protein (71aa)
id=1894668 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_200_b2_sep16_scaffold_541_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2885..3136
DNA (252bp) protein (84aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML06_9BACT
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_200_b2_sep16_scaffold_541_7
unknown

Not on your lists

3547..3774
DNA (228bp) protein (76aa)

This feature has no annotations

PLM3-1_200_b2_sep16_scaffold_541_8
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4053..4877)
DNA (825bp) protein (275aa)
Uncharacterized protein Tax=Caulobacter sp. AP07 RepID=J2H5T1_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL30773.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
extradiol ring-cleavage dioxygenase III subunit B
PLM3-1_200_b2_sep16_scaffold_541_9
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4874..5140)
DNA (267bp) protein (89aa)
Aromatic-ring-opening dioxygenase LigAB, LigA subunit Tax=Frankia sp. Iso899 RepID=UPI0003B4882C
Aromatic-ring-opening dioxygenase LigAB, LigA subunit
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3-1_200_b2_sep16_scaffold_541_10
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(5158..6132)
DNA (975bp) protein (325aa)
ornithine cyclodeaminase; K01750 ornithine cyclodeaminase [EC:4.3.1.12] bin=bin9_gal15 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
ornithine cyclodeaminase
Tax=CSP1_3_Armatimonadetes
PLM3-1_200_b2_sep16_scaffold_541_11
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6137..7147)
DNA (1011bp) protein (337aa)
dihydrodipicolinate synthase Tax=Frankia sp. Iso899 RepID=UPI0003B346D5
dihydrodipicolinate synthase
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM3-1_200_b2_sep16_scaffold_541_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

7272..8300
DNA (1029bp) protein (343aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3-1_200_b2_sep16_scaffold_541_13
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8300..10219
DNA (1920bp) protein (640aa)
Two-component hybrid sensor and regulator Tax=Bradyrhizobium sp. S23321 RepID=I0GB12_9BRAD
two-component hybrid sensor and regulator
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b2_sep16_scaffold_541_14
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10216..10599
DNA (384bp) protein (128aa)
Response receiver sensor histidine kinase, PAS domain-containing Tax=Geobacter sulfurreducens RepID=D7ALU4_GEOSK
histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b2_sep16_scaffold_541_15
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10605..11957
DNA (1353bp) protein (451aa)
Sigma-54 dependent transcriptional regulator Tax=Candidatus Nitrospira defluvii RepID=D8PII6_9BACT
sigma-54 dependent transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b2_sep16_scaffold_541_16
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12142..12633
DNA (492bp) protein (164aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b2_sep16_scaffold_541_17
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12630..14552)
DNA (1923bp) protein (641aa)
Transporter Tax=Marinobacter lipolyticus SM19 RepID=R8AZM0_9ALTE
RND superfamily exporter
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Displaying 17 items

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